RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

9 rows where bioproject = "PRJNA914897", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Eukaryota · 9 ✖

tax_clade 1

  • Apusozoa · 9 ✖

bioproject 1

  • PRJNA914897 · 9 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7273021 7273021 PRJNA914897_P_NODE_19646_length_384_cov_0.987138_g19224_i0 PRJNA914897 19646 384 0.987138 3.79060992 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 170 2.5100000000000002e-49   NR XP_013760592.1 461836 g19224 i0 67.7 0.9921875 127 38 99.2 1 383 3 125 248 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 381 170 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29455777 29455777 PRJNA914897_P_NODE_9870_length_602_cov_3.207940_g9455_i0 PRJNA914897 9870 602 3.20794 19.3117988 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 186 9.97e-53   NR XP_013759092.1 461836 g9455 i0 44.1 2.72591362126246 179 100 89.2 0 549 13 24 202 XP_013759092.1 succinyl-diaminopimelate desuccinylase [Thecamonas trahens ATCC 50062] diamond 1641 186 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29866624 29866624 PRJNA914897_P_NODE_21751_length_358_cov_2.817544_g21327_i0 PRJNA914897 21751 358 2.817544 10.08680752 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 59.7 1.48e-7   NR XP_013760565.1 461836 g21327 i0 36 3.68715083798883 75 46 61.2 1 221 3 106 180 XP_013760565.1 uncharacterized protein AMSG_02724 [Thecamonas trahens ATCC 50062] diamond 1320 59.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29993051 29993051 PRJNA914897_P_NODE_30571_length_285_cov_1.382075_g30147_i0 PRJNA914897 30571 285 1.382075 3.93891375 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 73.9 6.1e-13   NR XP_013760878.1 461836 g30147 i0 46 0.91578947368421 87 47 91.6 0 18 278 323 409 XP_013760878.1 uncharacterized protein AMSG_02333 [Thecamonas trahens ATCC 50062] diamond 261 73.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30341020 30341020 PRJNA914897_P_NODE_17552_length_413_cov_1.358824_g17130_i0 PRJNA914897 17552 413 1.358824 5.61194312 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 103 8.049999999999999e-23   NR XP_013759092.1 461836 g17130 i0 44.1 1.6271186440678 111 56 77 3 94 411 16 125 XP_013759092.1 succinyl-diaminopimelate desuccinylase [Thecamonas trahens ATCC 50062] diamond 672 103 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30972542 30972542 PRJNA914897_P_NODE_38974_length_247_cov_0.885057_g38550_i0 PRJNA914897 38974 247 0.885057 2.18609079 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 70.5 2.9e-13   NR XP_013759626.1 461836 g38550 i0 45 2.74493927125506 80 43 96 1 239 3 4 83 XP_013759626.1 prefoldin subunit 4 [Thecamonas trahens ATCC 50062] diamond 678 70.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31098661 31098661 PRJNA914897_P_NODE_41855_length_242_cov_0.911243_g41431_i0 PRJNA914897 41855 242 0.911243 2.20520806 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 100 1.23e-22   NR XP_013758049.1 461836 g41431 i0 58.8 0.991735537190083 80 33 99.2 0 240 1 200 279 XP_013758049.1 cytochrome P450 monooxygenase CYP51G1 [Thecamonas trahens ATCC 50062] diamond 240 100 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31731162 31731162 PRJNA914897_P_NODE_7137_length_731_cov_26.811550_g6752_i0 PRJNA914897 7137 731 26.81155 195.9924305 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 81.6 9.97e-14   NR XP_013758183.1 461836 g6752 i0 33 0.771545827633379 188 114 76.7 4 609 49 63 239 XP_013758183.1 cystatin-A2 [Thecamonas trahens ATCC 50062] diamond 564 81.6 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32308442 32308442 PRJNA914897_P_NODE_36539_length_251_cov_0.865169_g36115_i0 PRJNA914897 36539 251 0.865169 2.17157419 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 42.7 0.0419   NR XP_013753802.1 461836 g36115 i0 40.4 1.0996015936255 52 31 62.2 0 4 159 383 434 XP_013753802.1 uncharacterized protein AMSG_10339 [Thecamonas trahens ATCC 50062] diamond 276 42.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;