RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA911178", tax_phylum = "Nanobdellota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Nanobdellota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA911178 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5995683 5995683 PRJNA911178_P_NODE_241525_length_251_cov_0.865169_g239051_i0 PRJNA911178 241525 251 0.865169 2.17157419 Nanobdellota archaeon 2026764 Archaea Archaea 93.2 6.910000000000001e-21   NR MEK6829645.1 2026764 g239051 i0 56 0.896414342629482 75 33 89.6 0 246 22 111 185 MEK6829645.1 alpha-1,2-fucosyltransferase [Nanoarchaeota archaeon] diamond 225 93.2 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
32142547 32142547 PRJNA911178_P_NODE_202718_length_270_cov_1.558376_g200244_i0 PRJNA911178 202718 270 1.558376 4.2076152 Nanobdellota archaeon 2026764 Archaea Archaea 42 0.0456   NR MEK6861740.1 2026764 g200244 i0 45.5 0.488888888888889 44 24 48.9 0 137 6 4 47 MEK6861740.1 hypothetical protein [Nanoarchaeota archaeon] diamond 132 42 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
32868704 32868704 PRJNA911178_P_NODE_190300_length_277_cov_1.460784_g187827_i0 PRJNA911178 190300 277 1.460784 4.04637168 Nanobdellota archaeon 2026764 Archaea Archaea 122 7.37e-30   NR MCA9485224.1 2026764 g187827 i0 62.2 0.974729241877256 90 34 97.5 0 6 275 274 363 MCA9485224.1 GTP-binding protein [Nanoarchaeota archaeon] diamond 270 122 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;