RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA911178" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA911178 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26866501 26866501 PRJNA911178_P_NODE_265701_length_246_cov_0.890173_g263227_i0 PRJNA911178 265701 246 0.890173 2.18982558 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 78.2 6.08e-16   NR MBI1937777.1 2049428 g263227 i0 60 5.08536585365854 70 28 85.4 0 36 245 1 70 MBI1937777.1 phosphohistidine phosphatase SixA [Ignavibacteriales bacterium] diamond 1251 78.2 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
28635407 28635407 PRJNA911178_P_NODE_304907_length_227_cov_2.493506_g302433_i0 PRJNA911178 304907 227 2.493506 5.66025862 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 49.3 1.28e-4   NR MCF8268088.1 2049428 g302433 i0 47.5 1.53303964757709 59 26 75.3 2 46 216 81 136 MCF8268088.1 SDR family oxidoreductase [Ignavibacteriales bacterium] diamond 348 49.3 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
28982644 28982644 PRJNA911178_P_NODE_119968_length_335_cov_1.160305_g117496_i0 PRJNA911178 119968 335 1.160305 3.88702175 Ignavibacteria bacterium 2053306 Bacteria Bacteria 77.4 6.01e-14   NR MBK7253158.1 2053306 g117496 i0 42.2 4.97014925373134 109 47 94 2 335 21 253 349 MBK7253158.1 FG-GAP repeat protein [Ignavibacteria bacterium] diamond 1665 77.4 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;