RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA911178" and tax_phylum = "Fibrobacterota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Fibrobacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA911178 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
893248 893248 PRJNA911178_P_NODE_57161_length_461_cov_1.600515_g54721_i0 PRJNA911178 57161 461 1.600515 7.37837415 Fibrobacterota bacterium 2052160 Bacteria Bacteria 606 7.619999999999996e-169   NTclustered gi|1958056460|gb|CP064986.1| 2052160 g54721 i0 91.441 283.82863340564 444 34 96 4 3 444 2061137 2060696 Fibrobacteres bacterium isolate Fred_18-Q3-R57-64_MAXAC.109_cln chromosome, complete genome blastn 130845 606 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium
27593392 27593392 PRJNA911178_P_NODE_304284_length_228_cov_2.303226_g301810_i0 PRJNA911178 304284 228 2.303226 5.25135528 Chitinivibrionales bacterium 2663014 Bacteria Bacteria 90.5 1.46e-19   NR MBD3240736.1 2663014 g301810 i0 54.5 1.01315789473684 77 32 97.4 1 4 225 135 211 MBD3240736.1 hypothetical protein [Chitinivibrionales bacterium] diamond 231 90.5 1 Bacteria FCB group Pseudomonadati Fibrobacterota Chitinivibrionia Chitinivibrionales     Chitinivibrionales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;