RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA911178", tax_phylum = "Cossaviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Cossaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA911178 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5995971 5995971 PRJNA911178_P_NODE_277725_length_244_cov_0.900585_g275251_i0 PRJNA911178 277725 244 0.900585 2.1974274 Ciconia boyciana parvoviridae sp. 2794472 Viruses Viruses 178 3.48e-40   NTclustered gi|2045611283|gb|MW046548.1| 2794472 g275251 i0 80.508 1.9344262295082 236 42 96 2 7 240 428 661 MAG: Ciconia boyciana parvoviridae sp. isolate whs72par019 genomic sequence, sequence blastn 472 178 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Ciconia boyciana parvoviridae sp.
24201807 24201807 PRJNA911178_P_NODE_265379_length_246_cov_1.023121_g262905_i0 PRJNA911178 265379 246 1.023121 2.51687766 Betapolyomavirus 1891714 Viruses Viruses 442 1.1299999999999995e-119   NTclustered gi|13345942|gb|AF332562.1| 1891767 g262905 i0 99.587 76.869918699187 242 1 98 0 2 243 2958 3199 Simian virus 40 strain 777, complete genome blastn 18910 442 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
30782772 30782772 PRJNA911178_P_NODE_304534_length_227_cov_3.824675_g302060_i0 PRJNA911178 304534 227 3.824675 8.68201225 Betapolyomavirus macacae 1891767 Viruses Viruses 46.6 0.00131   NR AAK29054.1 1891767 g302060 i0 74.2 0.409691629955947 31 8 41 0 108 16 507 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 93 46.6 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;