RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA911178" and tax_kingdom = "Loebvirae"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 8 ✖

bioproject 1

  • PRJNA911178 · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9819810 9819810 PRJNA911178_P_NODE_176188_length_285_cov_1.754717_g173715_i0 PRJNA911178 176188 285 1.754717 5.00094345 Ralstonia phage 1 NP-2014 1460070 Viruses Viruses 385 2.29e-102   NTclustered gi|589287117|ref|NC_023586.1| 1460070 g173715 i0 91.697 4.85964912280702 277 23 97 0 3 279 4016 4292 Ralstonia phage 1 NP-2014, complete sequence blastn 1385 385 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Ralstonia phage 1 NP-2014
26771301 26771301 PRJNA911178_P_NODE_75381_length_407_cov_3.502994_g72918_i0 PRJNA911178 75381 407 3.502994 14.25718558 Escherichia phage Copypasta 3096133 Viruses Viruses 56.6 6.95e-8   NR WPH57058.1 3096133 g72918 i0 58.9 0.412776412776413 56 23 41.3 0 318 151 1 56 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 168 56.6 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
26992593 26992593 PRJNA911178_P_NODE_236122_length_253_cov_1.277778_g233648_i0 PRJNA911178 236122 253 1.277778 3.23277834 Escherichia phage Copypasta 3096133 Viruses Viruses 54.3 1.15e-7   NR WPH57058.1 3096133 g233648 i0 60.4 0.569169960474308 48 19 56.9 0 249 106 3 50 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 144 54.3 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
29045688 29045688 PRJNA911178_P_NODE_108328_length_349_cov_2.532609_g105856_i0 PRJNA911178 108328 349 2.532609 8.83880541 Escherichia phage Copypasta 3096133 Viruses Viruses 47 2.3e-4   NR WPH57058.1 3096133 g105856 i0 56 0.429799426934097 50 22 43 0 95 244 3 52 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 150 47 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
29676692 29676692 PRJNA911178_P_NODE_145250_length_309_cov_1.355932_g142777_i0 PRJNA911178 145250 309 1.355932 4.18982988 Escherichia phage Copypasta 3096133 Viruses Viruses 61.2 4.13e-10   NR WPH57058.1 3096133 g142777 i0 64 0.485436893203884 50 18 48.5 0 309 160 1 50 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 150 61.2 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
29771646 29771646 PRJNA911178_P_NODE_295791_length_240_cov_2.443114_g293317_i0 PRJNA911178 295791 240 2.443114 5.8634736 Escherichia phage Copypasta 3096133 Viruses Viruses 66.2 1.86e-12   NR WPH57058.1 3096133 g293317 i0 71.1 0.5625 45 13 56.3 0 5 139 12 56 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 135 66.2 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
30972489 30972489 PRJNA911178_P_NODE_291474_length_241_cov_1.434524_g289000_i0 PRJNA911178 291474 241 1.434524 3.45720284 Escherichia phage Copypasta 3096133 Viruses Viruses 51.6 1.15e-6   NR WPH57058.1 3096133 g289000 i0 61.2 0.609958506224066 49 19 61 0 240 94 8 56 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 147 51.6 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
31035874 31035874 PRJNA911178_P_NODE_306375_length_220_cov_7.210884_g303901_i0 PRJNA911178 306375 220 7.210884 15.8639448 Escherichia phage Copypasta 3096133 Viruses Viruses 47.4 4.2e-5   NR WPH57058.1 3096133 g303901 i0 69.4 1.00909090909091 36 11 49.1 0 124 17 1 36 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 222 47.4 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;