RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA911178", tax_kingdom = "Fungi" and tax_phylum = "Olpidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Olpidiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA911178 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30411366 30411366 PRJNA911178_P_NODE_163573_length_293_cov_2.118182_g161100_i0 PRJNA911178 163573 293 2.118182 6.20627326 Eukaryota 2759 Fungi Fungi 84 2.02e-17   NR KAG5461045.1 278681 g161100 i0 61.1 6.08191126279864 54 21 55.3 0 2 163 168 221 KAG5461045.1 MAG: eukaryotic translation elongation factor 2, partial [Olpidium bornovanus] diamond 1782 84 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
32079176 32079176 PRJNA911178_P_NODE_281498_length_243_cov_0.905882_g279024_i0 PRJNA911178 281498 243 0.905882 2.20129326 Olpidium bornovanus 278681 Fungi Fungi 67.4 6.31e-11   NR KAG5456221.1 278681 g279024 i0 54 2.88888888888889 50 23 61.7 0 48 197 169 218 KAG5456221.1 MAG: kinase-like domain-containing protein [Olpidium bornovanus] diamond 702 67.4 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;