RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJNA911178", tax_clade = "Stenosarchaea group" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 10 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 10 ✖

bioproject 1

  • PRJNA911178 · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4720379 4720379 PRJNA911178_P_NODE_171844_length_288_cov_1.158140_g169371_i0 PRJNA911178 171844 288 1.15814 3.3354432 Halorubrum sp. CBA1229 1853699 Archaea Archaea 462 1.04e-125   NTclustered gi|1861358827|gb|CP054585.1| 1853699 g169371 i0 96.429 8.16666666666667 280 10 97 0 9 288 1483314 1483593 Halorubrum sp. CBA1229 chromosome, complete genome blastn 2352 462 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum sp. CBA1229
11096285 11096285 PRJNA911178_P_NODE_280269_length_243_cov_1.635294_g277795_i0 PRJNA911178 280269 243 1.635294 3.97376442 Halococcus thailandensis 335952 Archaea Archaea 159 5.66e-46   NR WP_007740653.1 335952 g277795 i0 93.7 0.975308641975309 79 5 97.5 0 242 6 84 162 WP_007740653.1 alpha-ketoacid dehydrogenase subunit beta [Halococcus thailandensis] diamond 237 159 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus thailandensis
21294304 21294304 PRJNA911178_P_NODE_231397_length_255_cov_1.653846_g228923_i0 PRJNA911178 231397 255 1.653846 4.2173073 Halorussus gelatinilyticus 2937524 Archaea Archaea 78.7 3.82e-10   NTclustered gi|2234308622|gb|CP096658.1| 2937524 g228923 i0 88.06 0.262745098039216 67 6 26 2 177 242 2188778 2188843 Halorussus gelatinilyticus strain XZYJT40 chromosome, complete genome blastn 67 78.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haladaptataceae Halorussus Halorussus gelatinilyticus
27150455 27150455 PRJNA911178_P_NODE_171702_length_288_cov_1.274419_g169229_i0 PRJNA911178 171702 288 1.274419 3.67032672 Halococcus sp. PRR34 3020830 Archaea Archaea 135 2.37e-34   NR WP_273837522.1 3020830 g169229 i0 64.9 0.979166666666667 94 33 97.9 0 282 1 36 129 WP_273837522.1 hypothetical protein [Halococcus sp. PRR34] diamond 282 135 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus sp. PRR34
28263469 28263469 PRJNA911178_P_NODE_212426_length_265_cov_1.380208_g209952_i0 PRJNA911178 212426 265 1.380208 3.6575512 Halobacteriales 2235 Archaea Archaea 55.1 2.04e-6   NR WP_227230619.1 1126234 g209952 i0 67.5 2.12830188679245 40 13 45.3 0 10 129 294 333 WP_227230619.1 universal stress protein [Salinirubrum litoreum] diamond 564 55.5 0.992792792792793 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Salinirubrum Salinirubrum litoreum
29014353 29014353 PRJNA911178_P_NODE_261468_length_247_cov_0.885057_g258994_i0 PRJNA911178 261468 247 0.885057 2.18609079 Halonotius aquaticus 2216978 Archaea Archaea 156 8.34e-45   NR WP_120102540.1 2216978 g258994 i0 96.2 0.959514170040486 79 3 96 0 3 239 159 237 WP_120102540.1 C-terminal binding protein [Halonotius aquaticus] diamond 237 156 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halonotius Halonotius aquaticus
29235095 29235095 PRJNA911178_P_NODE_206549_length_268_cov_1.543590_g204075_i0 PRJNA911178 206549 268 1.54359 4.1368212 Haladaptatus sp. T7 2029368 Archaea Archaea 44.7 0.0098   NR WP_264783034.1 2029368 g204075 i0 42.4 0.66044776119403 59 31 62.7 1 253 86 71 129 WP_264783034.1 DUF7351 domain-containing protein [Haladaptatus sp. T7] diamond 177 44.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haladaptataceae Haladaptatus Haladaptatus sp. T7
30656369 30656369 PRJNA911178_P_NODE_289693_length_242_cov_0.875740_g287219_i0 PRJNA911178 289693 242 0.87574 2.1192908 Haloglomus sp. 2806254 Archaea Archaea 45.4 0.00368   NR MFB6207698.1 2806254 g287219 i0 48 0.619834710743802 50 25 60.7 1 8 154 193 242 MFB6207698.1 methionyl-tRNA formyltransferase [Haloglomus sp.] diamond 150 45.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Haloglomus Haloglomus sp.
31035864 31035864 PRJNA911178_P_NODE_270835_length_245_cov_0.895349_g268361_i0 PRJNA911178 270835 245 0.895349 2.19360505 Natronomonas sp. 2184060 Archaea Archaea 42.4 0.048   NR WP_310675245.1 2184060 g268361 i0 39.7 0.710204081632653 58 32 71 1 72 245 181 235 WP_310675245.1 phosphonate ABC transporter ATP-binding protein [Natronomonas sp.] diamond 174 42.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas sp.
31422316 31422316 PRJNA911178_P_NODE_252296_length_249_cov_0.875000_g249822_i0 PRJNA911178 252296 249 0.875 2.17875 root 1 Root_unresolved Root_unresolved 101 2e-24   NR WP_227231125.1 1126234 g249822 i0 60.5 7.12048192771084 76 26 91.6 1 228 1 22 93 WP_227231125.1 hypothetical protein [Salinirubrum litoreum] diamond 1773 101 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Salinirubrum Salinirubrum litoreum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;