contig_metadata
5 rows where bioproject = "PRJNA911178", tax_clade = "PVC group" and tax_phylum = "Lentisphaerota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22569401 | 22569401 | PRJNA911178_P_NODE_227518_length_257_cov_1.625000_g225044_i0 | PRJNA911178 | 227518 | 257 | 1.625 | 4.17625 | uncultured Lentisphaera sp. | 402590 | Bacteria | Bacteria | 370 | 5.68e-98 | NTclustered | gi|451919142|gb|KC453006.1| | 402590 | g225044 | i0 | 94.606 | 92.1945525291829 | 241 | 9 | 93 | 4 | 19 | 257 | 1 | 239 | Uncultured Lentisphaera sp. clone RLBp4508 16S ribosomal RNA gene, partial sequence | blastn | 23694 | 370 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Lentisphaerales | Lentisphaeraceae | Lentisphaera | uncultured Lentisphaera sp. | |
| 26651732 | 26651732 | PRJNA911178_P_NODE_70881_length_419_cov_1.268786_g68419_i0 | PRJNA911178 | 70881 | 419 | 1.268786 | 5.31621334 | Bacteria | 2 | Bacteria | Bacteria | 134 | 2.7899999999999993e-34 | NR | MCE9614942.1 | 1932692 | g68419 | i0 | 47.8 | 6.81622911694511 | 136 | 61 | 97.4 | 3 | 412 | 5 | 104 | 229 | MCE9614942.1 beta-glucosidase [Lentisphaerota bacterium] | diamond | 2856 | 134 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaerota bacterium | |||||
| 27309152 | 27309152 | PRJNA911178_P_NODE_280663_length_243_cov_1.382353_g278189_i0 | PRJNA911178 | 280663 | 243 | 1.382353 | 3.35911779 | Lentisphaerota bacterium | 1932692 | Bacteria | Bacteria | 44.7 | 0.00713 | NR | MBM4155799.1 | 1932692 | g278189 | i0 | 41.3 | 0.567901234567901 | 46 | 27 | 56.8 | 0 | 205 | 68 | 237 | 282 | MBM4155799.1 5'-3' exonuclease [Lentisphaerota bacterium] | diamond | 138 | 44.7 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaerota bacterium | |||||
| 28263471 | 28263471 | PRJNA911178_P_NODE_279546_length_243_cov_2.170588_g277072_i0 | PRJNA911178 | 279546 | 243 | 2.170588 | 5.27452884 | Bacteria | 2 | Bacteria | Bacteria | 87.4 | 6.76e-18 | NR | OGV34072.1 | 1798572 | g277072 | i0 | 51.3 | 19.9012345679012 | 78 | 36 | 93.8 | 1 | 229 | 2 | 505 | 582 | OGV34072.1 MAG: phosphoenolpyruvate carboxykinase [Lentisphaerae bacterium GWF2_45_14] | diamond | 4836 | 87.4 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaerae bacterium GWF2_45_14 | |||||
| 32023382 | 32023382 | PRJNA911178_P_NODE_18078_length_789_cov_2.289106_g15990_i0 | PRJNA911178 | 18078 | 789 | 2.289106 | 18.06104634 | PVC group | 1783257 | Bacteria | Bacteria | 111 | 3.05e-25 | NR | MBN1865604.1 | 2212475 | g15990 | i0 | 33 | 2.16730038022814 | 227 | 131 | 84.4 | 5 | 73 | 738 | 31 | 241 | MBN1865604.1 methyltransferase domain-containing protein [Victivallales bacterium] | diamond | 1710 | 111 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Victivallales | Victivallales bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;