RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA911178", tax_clade = "FCB group" and tax_phylum = "Rhodothermota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA911178 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13646446 13646446 PRJNA911178_P_NODE_281571_length_243_cov_0.905882_g279097_i0 PRJNA911178 281571 243 0.905882 2.20129326 Rhodothermales bacterium 2306054 Bacteria Bacteria 93.5 1.29e-14   NTclustered gi|2518540634|emb|OX638295.1| 2306054 g279097 i0 88.312 163.049382716049 77 9 32 0 1 77 369717 369641 MAG: Rhodothermales bacterium isolate 379627e8-994f-481d-907a-dd5b185e1f88 genome assembly, chromosome: 1 blastn 39621 93.5 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
26683554 26683554 PRJNA911178_P_NODE_277381_length_244_cov_0.900585_g274907_i0 PRJNA911178 277381 244 0.900585 2.1974274 FCB group 1783270 Bacteria Bacteria 54.7 2.15e-6   NR HLE56026.1 2497633 g274907 i0 40.6 2.20081967213115 64 38 78.7 0 2 193 40 103 HLE56026.1 YncE family protein [Rhodothermia bacterium] diamond 537 54.7 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia       Rhodothermia bacterium
27056138 27056138 PRJNA911178_P_NODE_103302_length_356_cov_2.141343_g100831_i0 PRJNA911178 103302 356 2.141343 7.62318108 Rhodothermales bacterium 2306054 Bacteria Bacteria 132 1.52e-33   NR MDX1429196.1 2306054 g100831 i0 58.4 0.952247191011236 113 46 95.2 1 6 344 352 463 MDX1429196.1 DUF4382 domain-containing protein [Rhodothermales bacterium] diamond 339 132 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;