RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA911178", tax_clade = "FCB group" and tax_phylum = "Candidatus Cloacimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA911178 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5996208 5996208 PRJNA911178_P_NODE_303405_length_229_cov_2.711538_g300931_i0 PRJNA911178 303405 229 2.711538 6.20942202 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 112 9.12e-27   NR NLK49190.1 2030808 g300931 i0 72.4 2.98689956331878 76 21 99.6 0 229 2 83 158 NLK49190.1 L-glutamate gamma-semialdehyde dehydrogenase [Candidatus Cloacimonadota bacterium] diamond 684 112 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
27940616 27940616 PRJNA911178_P_NODE_244765_length_250_cov_1.548023_g242291_i0 PRJNA911178 244765 250 1.548023 3.8700575 Candidatus Cloacimonas sp. SDB 1732214 Bacteria Bacteria 134 3.23e-35   NR KQC06462.1 1732214 g242291 i0 64.6 1.944 82 29 98.4 0 3 248 371 452 KQC06462.1 MAG: hypothetical protein APR54_07205, partial [Candidatus Cloacimonas sp. SDB] diamond 486 134 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales Candidatus Cloacimonadaceae Candidatus Cloacimonas Candidatus Cloacimonas sp. SDB

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;