RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA911178", tax_clade = "FCB group" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA911178 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27158011 27158011 PRJNA911178_P_NODE_301122_length_232_cov_3.786164_g298648_i0 PRJNA911178 301122 232 3.786164 8.78390048 Pseudomonadati 3379134 Bacteria Bacteria 127 5.06e-36   NR HKL15208.1 2053516 g298648 i0 71.1 11.7284482758621 76 21 98.3 1 230 3 33 107 HKL15208.1 hypothetical protein [Balneolaceae bacterium] diamond 2721 128 0.9921875 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium
28603655 28603655 PRJNA911178_P_NODE_82167_length_392_cov_3.642633_g79700_i0 PRJNA911178 82167 392 3.642633 14.27912136 Balneolales bacterium 2497613 Bacteria Bacteria 106 5.919999999999999e-24   NR HKJ30596.1 2497613 g79700 i0 40 1.03316326530612 135 71 97.2 5 12 392 27 159 HKJ30596.1 phosphatidylinositol-specific phospholipase C domain-containing protein [Balneolales bacterium] diamond 405 106 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales     Balneolales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;