RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA911178", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Woeseibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Woeseibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA911178 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2525569 2525569 PRJNA911178_P_NODE_199382_length_272_cov_1.487437_g196909_i0 PRJNA911178 199382 272 1.487437 4.04582864 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 91.3 6.680000000000001e-22   NR MBP7875968.1 2026804 g196909 i0 88.5 0.573529411764706 52 6 57.4 0 3 158 29 80 MBP7875968.1 hypothetical protein [Candidatus Woesebacteria bacterium] diamond 156 91.3 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
27530016 27530016 PRJNA911178_P_NODE_259643_length_247_cov_1.557471_g257169_i0 PRJNA911178 259643 247 1.557471 3.84695337 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 59.7 1.43e-9   NR MBP7875968.1 2026804 g257169 i0 47.8 0.813765182186235 67 35 81.4 0 234 34 14 80 MBP7875968.1 hypothetical protein [Candidatus Woesebacteria bacterium] diamond 201 59.7 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;