RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA911178", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Nomuraibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA911178 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9819711 9819711 PRJNA911178_P_NODE_164688_length_292_cov_2.474886_g162215_i0 PRJNA911178 164688 292 2.474886 7.22666712 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 475 1.3599999999999999e-129   NTclustered gi|2258875662|gb|CP060232.1| 2052152 g162215 i0 96.831 154.102739726027 284 9 97 0 1 284 963815 964098 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-40 chromosome, complete genome blastn 44998 475 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
12372023 12372023 PRJNA911178_P_NODE_299090_length_235_cov_3.296296_g296616_i0 PRJNA911178 299090 235 3.296296 7.7462956 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 375 1.1e-99   NTclustered gi|2258875662|gb|CP060232.1| 2052152 g296616 i0 95.708 90.6382978723404 233 10 99 0 3 235 964847 964615 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-40 chromosome, complete genome blastn 21300 375 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;