RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA911178", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Altimarinota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA911178 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17470264 17470264 PRJNA911178_P_NODE_191854_length_276_cov_1.512315_g189381_i0 PRJNA911178 191854 276 1.512315 4.1739894 Candidatus Gracilibacteria bacterium HOT-871 1540872 Bacteria Bacteria 494 3.51e-135   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g189381 i0 99.267 3.98550724637681 273 2 99 0 1 273 891289 891017 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 1100 494 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
26929616 26929616 PRJNA911178_P_NODE_43542_length_522_cov_1.726058_g41123_i0 PRJNA911178 43542 522 1.726058 9.01002276 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 51.2 7.5e-5   NR MBP9779009.1 2044595 g41123 i0 41.3 0.264367816091954 46 27 26.4 0 12 149 60 105 MBP9779009.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 138 51.2 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
31984202 31984202 PRJNA911178_P_NODE_254758_length_248_cov_1.445714_g252284_i0 PRJNA911178 254758 248 1.445714 3.58537072 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 87.8 1.69e-19   NR MCT4592035.1 2044595 g252284 i0 43.8 0.967741935483871 80 45 96.8 0 9 248 64 143 MCT4592035.1 NAD(P)H-dependent oxidoreductase [Candidatus Altimarinota bacterium] diamond 240 87.8 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;