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contig_metadata

20 rows where bioproject = "PRJNA911178", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 20 ✖

tax_clade 1

  • Apusozoa · 20 ✖

bioproject 1

  • PRJNA911178 · 20 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4720436 4720436 PRJNA911178_P_NODE_179204_length_283_cov_2.461905_g176731_i0 PRJNA911178 179204 283 2.461905 6.96719115 Thecamonas trahens 529818 Root_unresolved Root_unresolved 121 7.059999999999999e-23   NTclustered gi|923136453|ref|XM_013906238.1| 461836 g176731 i0 81.818 0.749116607773852 143 26 51 0 5 147 290 148 Thecamonas trahens ATCC 50062 50S ribosomal protein L36e (AMSG_01644), partial mRNA blastn 212 121 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
5995581 5995581 PRJNA911178_P_NODE_228045_length_257_cov_1.293478_g225571_i0 PRJNA911178 228045 257 1.293478 3.32423846 Thecamonas trahens 529818 Root_unresolved Root_unresolved 54.7 0.006   NTclustered gi|923131822|ref|XM_013903923.1| 461836 g225571 i0 92.308 0.151750972762646 39 1 15 2 50 88 590 554 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_02458), partial mRNA blastn 39 54.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
8546408 8546408 PRJNA911178_P_NODE_74947_length_408_cov_4.438806_g72484_i0 PRJNA911178 74947 408 4.438806 18.11032848 Cavaliersmithia chaoae 3003318 Root_unresolved Root_unresolved 200 1.32e-46   NTclustered gi|2206682172|gb|OM966645.1| 3003318 g72484 i0 89.744 37.5980392156863 156 16 38 0 185 340 6608 6453 Cavaliersmithia chaoae strain FABANU small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15340 200 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Cavaliersmithia Cavaliersmithia chaoae
13646193 13646193 PRJNA911178_P_NODE_253271_length_248_cov_9.914286_g250797_i0 PRJNA911178 253271 248 9.914286 24.58742928 Thecamonas trahens 529818 Root_unresolved Root_unresolved 261 3.42e-65   NTclustered gi|923124074|ref|XM_013900052.1| 461836 g250797 i0 88.479 83.7540322580645 217 23 87 2 32 247 1 216 Thecamonas trahens ATCC 50062 actin-3 (AMSG_08145), partial mRNA blastn 20771 261 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
16196026 16196026 PRJNA911178_P_NODE_44913_length_514_cov_1225.154195_g42492_i0 PRJNA911178 44913 514 1225.154195 6297.2925623 Karpovia croatica 2925417 Root_unresolved Root_unresolved 100 1.77e-16   NTclustered gi|2206682173|gb|OM966646.1| 2925417 g42492 i0 88.235 12.147859922179 85 9 17 1 69 153 6103 6020 Karpovia croatica strain CRO19P6 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 6244 100 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Karpovia Karpovia croatica
25118849 25118849 PRJNA911178_P_NODE_281080_length_243_cov_1.200000_g278606_i0 PRJNA911178 281080 243 1.2 2.916 Thecamonas trahens 529818 Root_unresolved Root_unresolved 187 5.7499999999999985e-43   NTclustered gi|923120946|ref|XM_013898491.1| 461836 g278606 i0 83.838 25.9794238683128 198 30 81 2 47 243 350 546 Thecamonas trahens ATCC 50062 polyadenylate-binding protein 1-B (AMSG_09898), partial mRNA blastn 6313 187 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28137525 28137525 PRJNA911178_P_NODE_108645_length_349_cov_1.369565_g106173_i0 PRJNA911178 108645 349 1.369565 4.77978185 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 64.7 2.31e-9   NR XP_013763060.1 461836 g106173 i0 33.3 2.32091690544413 126 71 98 4 344 3 201 325 XP_013763060.1 lysosomal protective protein chain [Thecamonas trahens ATCC 50062] diamond 810 64.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29329727 29329727 PRJNA911178_P_NODE_202089_length_270_cov_3.309645_g199615_i0 PRJNA911178 202089 270 3.309645 8.9360415 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 134 1.24e-34   NR XP_013762089.1 461836 g199615 i0 70.9 0.955555555555556 86 25 95.6 0 11 268 105 190 XP_013762089.1 inositol-3-phosphate synthase [Thecamonas trahens ATCC 50062] diamond 258 134 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30182406 30182406 PRJNA911178_P_NODE_183032_length_281_cov_1.649038_g180559_i0 PRJNA911178 183032 281 1.649038 4.63379678 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 61.6 1.37e-8   NR XP_013756049.1 461836 g180559 i0 33.3 1.79359430604982 84 56 89.7 0 10 261 314 397 XP_013756049.1 NAD-specific glutamate dehydrogenase [Thecamonas trahens ATCC 50062] diamond 504 61.6 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30379829 30379829 PRJNA911178_P_NODE_19212_length_765_cov_3.310694_g17092_i0 PRJNA911178 19212 765 3.310694 25.3268091 root 1 Root_unresolved Root_unresolved 81.3 2.61e-13   NR XP_013757898.1 461836 g17092 i0 32.4 1.04313725490196 173 99 67.1 6 225 737 3046 3202 XP_013757898.1 uncharacterized protein AMSG_05495 [Thecamonas trahens ATCC 50062] diamond 798 81.3 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30467167 30467167 PRJNA911178_P_NODE_36113_length_569_cov_1.485887_g33730_i0 PRJNA911178 36113 569 1.485887 8.45469703 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 65.1 1.84e-8   NR XP_013757898.1 461836 g33730 i0 31.1 0.864674868189807 164 92 82.8 7 476 6 3035 3184 XP_013757898.1 uncharacterized protein AMSG_05495 [Thecamonas trahens ATCC 50062] diamond 492 65.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30561381 30561381 PRJNA911178_P_NODE_7393_length_1200_cov_3.730257_g6045_i0 PRJNA911178 7393 1200 3.730257 44.763084 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 78.6 2.09e-11   NR XP_013757898.1 461836 g6045 i0 31.2 0.585 234 136 54.8 8 411 1067 2995 3218 XP_013757898.1 uncharacterized protein AMSG_05495 [Thecamonas trahens ATCC 50062] diamond 702 78.6 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31794242 31794242 PRJNA911178_P_NODE_229777_length_256_cov_1.475410_g227303_i0 PRJNA911178 229777 256 1.47541 3.7770496 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 60.5 2.57e-8   NR XP_013761874.1 461836 g227303 i0 42 0.80859375 69 38 80.9 2 219 13 997 1063 XP_013761874.1 ubiquitin-activating enzyme E1 [Thecamonas trahens ATCC 50062] diamond 207 60.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31825922 31825922 PRJNA911178_P_NODE_195277_length_274_cov_1.875622_g192804_i0 PRJNA911178 195277 274 1.875622 5.13920428 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 146 1.62e-38   NR XP_013754965.1 461836 g192804 i0 78.4 1.94890510948905 88 19 96.4 0 10 273 154 241 XP_013754965.1 transketolase domain-containing protein [Thecamonas trahens ATCC 50062] diamond 534 146 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31921017 31921017 PRJNA911178_P_NODE_263337_length_246_cov_4.352601_g260863_i0 PRJNA911178 263337 246 4.352601 10.70739846 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 103 5.39e-24   NR XP_013757656.1 461836 g260863 i0 73.1 0.817073170731707 67 18 81.7 0 43 243 6 72 XP_013757656.1 NAD-dependent epimerase/dehydratase [Thecamonas trahens ATCC 50062] diamond 201 103 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32110901 32110901 PRJNA911178_P_NODE_206778_length_268_cov_1.446154_g204304_i0 PRJNA911178 206778 268 1.446154 3.87569272 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 67.8 2.22e-12   NR XP_013760378.1 461836 g204304 i0 51.7 0.671641791044776 60 29 67.2 0 11 190 29 88 XP_013760378.1 uncharacterized protein AMSG_03040 [Thecamonas trahens ATCC 50062] diamond 180 67.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32269250 32269250 PRJNA911178_P_NODE_261238_length_247_cov_0.885057_g258764_i0 PRJNA911178 261238 247 0.885057 2.18609079 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 63.9 1.2e-9   NR XP_013759982.1 461836 g258764 i0 47.3 0.898785425101215 74 31 86.2 2 215 3 57 125 XP_013759982.1 cytochrome c peroxidase [Thecamonas trahens ATCC 50062] diamond 222 63.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32427319 32427319 PRJNA911178_P_NODE_17079_length_811_cov_3.348238_g15019_i0 PRJNA911178 17079 811 3.348238 27.15421018 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 144 1.03e-35   NR XP_013759182.1 461836 g15019 i0 35.8 0.950678175092478 257 160 95.1 4 40 810 8 259 XP_013759182.1 peptidase S8 and S53 domain-containing protein [Thecamonas trahens ATCC 50062] diamond 771 144 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32616875 32616875 PRJNA911178_P_NODE_205420_length_269_cov_1.112245_g202946_i0 PRJNA911178 205420 269 1.112245 2.99193905 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 85.5 4.69e-17   NR XP_013755517.1 461836 g202946 i0 45.6 0.8810408921933092 79 43 88.1 0 33 269 704 782 XP_013755517.1 fumarate reductase flavoprotein subunit [Thecamonas trahens ATCC 50062] diamond 237 85.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32711231 32711231 PRJNA911178_P_NODE_13380_length_915_cov_2.302850_g11515_i0 PRJNA911178 13380 915 2.30285 21.0710775 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 334 6.61e-108   NR XP_013759182.1 461836 g11515 i0 57.5 0.980327868852459 299 113 98 3 899 3 250 534 XP_013759182.1 peptidase S8 and S53 domain-containing protein [Thecamonas trahens ATCC 50062] diamond 897 334 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;