RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA909412", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Thermoproteota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA909412 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27087745 27087745 PRJNA909412_P_NODE_17582_length_150_cov_2.603604_g17441_i0 PRJNA909412 17582 150 2.603604 3.905406 Thermoproteota archaeon 2056631 Archaea Archaea 65.5 1.04e-11   NR NLE05266.1 2056631 g17441 i0 57.4 3.74 47 20 94 0 2 142 104 150 NLE05266.1 hypothetical protein [Thermoproteota archaeon] diamond 561 65.5 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
32490689 32490689 PRJNA909412_P_NODE_13019_length_161_cov_1.368852_g12878_i0 PRJNA909412 13019 161 1.368852 2.20385172 Thermofilum sp. 1961369 Archaea Archaea 48.1 1.53e-4   NR MCC6039536.1 1961369 g12878 i0 52.5 0.745341614906832 40 19 74.5 0 121 2 16 55 MCC6039536.1 leucine--tRNA ligase [Thermofilum sp.] diamond 120 48.1 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermofilales Thermofilaceae Thermofilum Thermofilum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;