RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

18 rows where bioproject = "PRJNA909412" and tax_phylum = "Endomyxa"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Endomyxa · 18 ✖

tax_clade 1

bioproject 1

  • PRJNA909412 · 18 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4719227 4719227 PRJNA909412_P_NODE_4784_length_238_cov_4.145729_g4643_i0 PRJNA909412 4784 238 4.145729 9.86683502 Phytomyxea 2779609 SAR_Eukaryotes SAR_Eukaryotes 124 4.94e-31   NR CEO96359.1 37360 g4643 i0 73.1 4.91596638655462 78 21 98.3 0 3 236 506 583 CEO96359.1 hypothetical protein PBRA_005030 [Plasmodiophora brassicae] diamond 1170 124 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
5993970 5993970 PRJNA909412_P_NODE_825_length_616_cov_2.821490_g708_i0 PRJNA909412 825 616 2.82149 17.3803784 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 148 2.08e-41   NR CEO95143.1 37360 g708 i0 63.8 0.564935064935065 116 40 56.5 2 613 266 68 181 CEO95143.1 hypothetical protein PBRA_003909 [Plasmodiophora brassicae] diamond 348 148 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
8543616 8543616 PRJNA909412_P_NODE_2727_length_320_cov_2.370107_g2587_i0 PRJNA909412 2727 320 2.370107 7.5843424 Viridiplantae 33090 SAR_Eukaryotes SAR_Eukaryotes 143 1.3e-41   NR CEO94766.1 37360 g2587 i0 83.5 12.328125 91 14 85.3 1 31 303 1 90 CEO94766.1 hypothetical protein PBRA_003579 [Plasmodiophora brassicae] diamond 3945 143 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
9818575 9818575 PRJNA909412_P_NODE_3588_length_277_cov_3.105042_g3447_i0 PRJNA909412 3588 277 3.105042 8.60096634 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 123 6.99e-33   NR CEP01997.1 37360 g3447 i0 71.6 4.45126353790614 81 23 87.7 0 29 271 1 81 CEP01997.1 hypothetical protein PBRA_002262 [Plasmodiophora brassicae] diamond 1233 123 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
20017267 20017267 PRJNA909412_P_NODE_376_length_925_cov_2.968397_g308_i0 PRJNA909412 376 925 2.968397 27.45767225 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 354 9.639999999999997e-119   NR CEP02379.1 37360 g308 i0 62 1.88108108108108 305 108 96.3 4 24 914 1 305 CEP02379.1 hypothetical protein PBRA_008963 [Plasmodiophora brassicae] diamond 1740 354 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
22567803 22567803 PRJNA909412_P_NODE_17578_length_150_cov_2.612613_g17437_i0 PRJNA909412 17578 150 2.612613 3.9189195 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 92 1.24e-20   NR CEP03329.1 37360 g17437 i0 86 1 50 7 100 0 1 150 108 157 CEP03329.1 hypothetical protein PBRA_003089 [Plasmodiophora brassicae] diamond 150 92 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
23842884 23842884 PRJNA909412_P_NODE_1199_length_512_cov_3.031712_g1061_i0 PRJNA909412 1199 512 3.031712 15.52236544 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 226 5.910000000000001e-73   NR CEO99151.1 37360 g1061 i0 78.6 7.376953125 140 30 82 0 488 69 7 146 CEO99151.1 hypothetical protein PBRA_001056 [Plasmodiophora brassicae] diamond 3777 226 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
26739096 26739096 PRJNA909412_P_NODE_14101_length_158_cov_3.731092_g13960_i0 PRJNA909412 14101 158 3.731092 5.89512536 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 47 1.48e-4   NR CEO99081.1 37360 g13960 i0 63 0.512658227848101 27 10 51.3 0 1 81 116 142 CEO99081.1 hypothetical protein PBRA_007195 [Plasmodiophora brassicae] diamond 81 47 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
27814413 27814413 PRJNA909412_P_NODE_104_length_1459_cov_5.140141_g79_i0 PRJNA909412 104 1459 5.140141 74.99465719 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.00376   NR CEP03244.1 37360 g79 i0 51.1 0.203564084989719 47 23 9.7 0 279 139 235 281 CEP03244.1 hypothetical protein PBRA_003004 [Plasmodiophora brassicae] diamond 297 52.8 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
28295153 28295153 PRJNA909412_P_NODE_3766_length_270_cov_3.748918_g3625_i0 PRJNA909412 3766 270 3.748918 10.1220786 Plasmodiophorida 37357 SAR_Eukaryotes SAR_Eukaryotes 94.4 2.45e-22   NR CEP02236.1 37360 g3625 i0 56.3 1.77777777777778 80 35 88.9 0 242 3 1 80 CEP02236.1 hypothetical protein PBRA_002501 [Plasmodiophora brassicae] diamond 480 95.1 0.992639327024185 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
28445787 28445787 PRJNA909412_P_NODE_1126_length_528_cov_3.167689_g994_i0 PRJNA909412 1126 528 3.167689 16.72539792 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 158 1.91e-45   NR CEP03344.1 37360 g994 i0 65.8 1.98863636363636 114 39 64.8 0 528 187 77 190 CEP03344.1 hypothetical protein PBRA_003104 [Plasmodiophora brassicae] diamond 1050 158 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
28824266 28824266 PRJNA909412_P_NODE_5388_length_224_cov_3.291892_g5247_i0 PRJNA909412 5388 224 3.291892 7.37383808 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 50.8 2.2e-5   NR CEP03333.1 37360 g5247 i0 39.3 0.816964285714286 61 37 81.7 0 197 15 45 105 CEP03333.1 hypothetical protein PBRA_003093 [Plasmodiophora brassicae] diamond 183 50.8 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
28887570 28887570 PRJNA909412_P_NODE_1028_length_554_cov_2.939806_g901_i0 PRJNA909412 1028 554 2.939806 16.28652524 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 265 1.4600000000000001e-86   NR CEP01968.1 37360 g901 i0 71.2 3.985559566787 184 53 99.6 0 3 554 40 223 CEP01968.1 hypothetical protein PBRA_002233 [Plasmodiophora brassicae] diamond 2208 265 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
29613514 29613514 PRJNA909412_P_NODE_5070_length_232_cov_1.720207_g4929_i0 PRJNA909412 5070 232 1.720207 3.99088024 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 148 6.71e-42   NR CEP01219.1 37360 g4929 i0 88.2 0.982758620689655 76 9 98.3 0 3 230 158 233 CEP01219.1 hypothetical protein PBRA_001825 [Plasmodiophora brassicae] diamond 228 148 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
29929855 29929855 PRJNA909412_P_NODE_16451_length_152_cov_1.486726_g16310_i0 PRJNA909412 16451 152 1.486726 2.25982352 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 80.5 5.26e-16   NR CEO99023.1 37360 g16310 i0 75.5 0.967105263157895 49 12 96.7 0 149 3 709 757 CEO99023.1 hypothetical protein PBRA_007137 [Plasmodiophora brassicae] diamond 147 80.5 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
30877489 30877489 PRJNA909412_P_NODE_494_length_805_cov_3.163185_g410_i0 PRJNA909412 494 805 3.163185 25.46363925 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 182 2.22e-52   NR CEO96095.1 37360 g410 i0 54 0.559006211180124 150 69 55.9 0 11 460 118 267 CEO96095.1 hypothetical protein PBRA_004785 [Plasmodiophora brassicae] diamond 450 182 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
30972416 30972416 PRJNA909412_P_NODE_12034_length_164_cov_2.408000_g11893_i0 PRJNA909412 12034 164 2.408 3.94912 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 57 1.18e-7   NR CEO98020.1 37360 g11893 i0 55.3 0.859756097560976 47 21 86 0 22 162 263 309 CEO98020.1 hypothetical protein PBRA_006134 [Plasmodiophora brassicae] diamond 141 57 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
31984158 31984158 PRJNA909412_P_NODE_4238_length_255_cov_2.495370_g4097_i0 PRJNA909412 4238 255 2.49537 6.3631935 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 99.4 6.57e-25   NR CEP02593.1 37360 g4097 i0 64.1 1.87058823529412 78 28 91.8 0 239 6 11 88 CEP02593.1 hypothetical protein PBRA_002561 [Plasmodiophora brassicae] diamond 477 99.4 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;