RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA909412", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 5 ✖

tax_kingdom 1

  • Metazoa · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA909412 · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9818566 9818566 PRJNA909412_P_NODE_2208_length_359_cov_1.987500_g2068_i0 PRJNA909412 2208 359 1.9875 7.135125 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 56.5 0.003   NTclustered gi|690513703|emb|LN064217.1| 99802 g2068 i0 100 2.28133704735376 30 0 8 0 288 317 1135 1164 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0062117 blastn 819 56.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
27940568 27940568 PRJNA909412_P_NODE_3325_length_288_cov_2.767068_g3184_i0 PRJNA909412 3325 288 2.767068 7.96915584 Platydemus manokwari 79748 Platyhelminthes Platyhelminthes 54.3 4.16e-6   NR UKA77685.1 79748 g3184 i0 59.1 0.458333333333333 44 18 45.8 0 287 156 184 227 UKA77685.1 cytochrome c oxidase subunit III [Platydemus manokwari] diamond 132 54.3 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Geoplanidae Platydemus Platydemus manokwari
29620866 29620866 PRJNA909412_P_NODE_14250_length_158_cov_2.571429_g14109_i0 PRJNA909412 14250 158 2.571429 4.06285782 Metazoa 33208 Platyhelminthes Platyhelminthes 47.8 9.34e-5   NR AAP06472.1 6182 g14109 i0 38 3.5886075949367102 50 31 94.9 0 157 8 53 102 AAP06472.1 similar to GenBank Accession Number A31486 translation initiation factor eIF-5A in validated - rabbit [Schistosoma japonicum] diamond 567 48.1 0.993762993762994 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
30126461 30126461 PRJNA909412_P_NODE_4532_length_245_cov_3.169903_g4391_i0 PRJNA909412 4532 245 3.169903 7.76626235 Plagiorchiida 27871 Platyhelminthes Platyhelminthes 44.7 0.00795   NR TPP61277.1 46835 g4391 i0 43.9 1.86122448979592 41 23 50.2 0 232 110 54 94 TPP61277.1 La protein 7, partial [Fasciola gigantica] diamond 456 45.1 0.991130820399113 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciola Fasciola gigantica
31636217 31636217 PRJNA909412_P_NODE_7596_length_192_cov_1.901961_g7455_i0 PRJNA909412 7596 192 1.901961 3.65176512 Schistosoma mekongi 38744 Platyhelminthes Platyhelminthes 56.6 2.4e-7   NR KAK4476179.1 38744 g7455 i0 42.9 5.890625 63 36 98.4 0 2 190 1753 1815 KAK4476179.1 hypothetical protein MN116_001393 [Schistosoma mekongi] diamond 1131 56.6 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mekongi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;