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contig_metadata

23 rows where bioproject = "PRJNA909412", tax_clade = "Sar" and tax_phylum = "Oomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Oomycota · 23 ✖

tax_clade 1

  • Sar · 23 ✖

bioproject 1

  • PRJNA909412 · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
890629 890629 PRJNA909412_P_NODE_1561_length_443_cov_2.759901_g1421_i0 PRJNA909412 1561 443 2.759901 12.22636143 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 166 4.08e-49   NR DBA01302.1 4803 g1421 i0 58.6 10.4424379232506 140 52 91.4 2 406 2 42 180 DBA01302.1 TPA: hypothetical protein N0F65_001807 [Lagenidium giganteum] diamond 4626 167 0.994011976047904 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
4719229 4719229 PRJNA909412_P_NODE_5724_length_218_cov_2.782123_g5583_i0 PRJNA909412 5724 218 2.782123 6.06502814 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 106 1.46e-18   NTclustered gi|166034691|emb|CU356728.1| 100861 g5583 i0 84.259 3.46330275229358 108 17 50 0 29 136 735 842 Aphanomyces euteiches cDNA blastn 755 106 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
7268849 7268849 PRJNA909412_P_NODE_2066_length_375_cov_2.690476_g1926_i0 PRJNA909412 2066 375 2.690476 10.089285 Achlya klebsiana 4767 SAR_Eukaryotes SAR_Eukaryotes 324 6.85e-84   NTclustered gi|166301|gb|J05597.1|ACKBTUB 4767 g1926 i0 86.333 75.0506666666667 300 37 79 2 79 375 1542 1244 A.klebsiana beta-tubulin gene, complete cds blastn 28144 324 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya klebsiana
7627293 7627293 PRJNA909412_P_NODE_5986_length_214_cov_2.057143_g5845_i0 PRJNA909412 5986 214 2.057143 4.40228602 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 132 1.02e-33   NR XP_024579212.1 4781 g5845 i0 88.6 15.7289719626168 70 8 98.1 0 213 4 478 547 XP_024579212.1 pre-mrna-processing-splicing factor 8 [Plasmopara halstedii] diamond 3366 132 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
9818557 9818557 PRJNA909412_P_NODE_17788_length_150_cov_1.927928_g17647_i0 PRJNA909412 17788 150 1.927928 2.891892 Pythium monospermum 92964 SAR_Eukaryotes SAR_Eukaryotes 267 4.009999999999999e-67   NTclustered gi|33520250|gb|AY273995.1| 92964 g17647 i0 98.667 86.04 150 2 100 0 1 150 113 262 Pythium monospermum large subunit ribosomal RNA gene, partial sequence blastn 12906 267 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium monospermum
11094240 11094240 PRJNA909412_P_NODE_1409_length_464_cov_2.708235_g1270_i0 PRJNA909412 1409 464 2.708235 12.5662104 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 107 1.1099999999999999e-23   NR DAZ96774.1 4803 g1270 i0 43.5 5.93534482758621 124 65 76.9 2 358 2 39 162 DAZ96774.1 TPA: hypothetical protein N0F65_005772 [Lagenidium giganteum] diamond 2754 108 0.990740740740741 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
16193478 16193478 PRJNA909412_P_NODE_2373_length_345_cov_3.918301_g2233_i0 PRJNA909412 2373 345 3.918301 13.51813845 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 68.6 1.1e-10   NR DBA01819.1 4803 g2233 i0 43.1 0.947826086956522 109 58 91.3 2 24 338 99 207 DBA01819.1 TPA: hypothetical protein N0F65_002935 [Lagenidium giganteum] diamond 327 68.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
18742180 18742180 PRJNA909412_P_NODE_1575_length_440_cov_4.403990_g1435_i0 PRJNA909412 1575 440 4.40399 19.377556 Viridiplantae 33090 SAR_Eukaryotes SAR_Eukaryotes 156 4.96e-41   NR KAH9127992.1 100861 g1435 i0 55.2 14.8295454545455 145 60 98.9 1 1 435 687 826 KAH9127992.1 hypothetical protein AeMF1_001797, partial [Aphanomyces euteiches] diamond 6525 156 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
21292596 21292596 PRJNA909412_P_NODE_1977_length_384_cov_14.800000_g1837_i0 PRJNA909412 1977 384 14.8 56.832 root 1 Root_unresolved Root_unresolved 201 3.13e-63   NR KAI9994045.1 4787 g1837 i0 75.8 18.7421875 124 29 96.1 1 371 3 53 176 KAI9994045.1 hypothetical protein PInf_016604 [Phytophthora infestans] diamond 7197 201 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
22567752 22567752 PRJNA909412_P_NODE_1238_length_502_cov_3.580994_g1099_i0 PRJNA909412 1238 502 3.580994 17.97658988 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 201 1.13e-62   NR OQR91948.1 1202772 g1099 i0 60.1 3.70517928286853 153 61 91.4 0 460 2 5 157 OQR91948.1 60S ribosomal protein L18a [Achlya hypogyna] diamond 1860 201 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
27063478 27063478 PRJNA909412_P_NODE_16402_length_152_cov_1.486726_g16261_i0 PRJNA909412 16402 152 1.486726 2.25982352 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 70.1 1.96e-12   NR KAG1685155.1 4784 g16261 i0 68.1 2.78289473684211 47 15 92.8 0 146 6 261 307 KAG1685155.1 hypothetical protein DVH05_009702 [Phytophthora capsici] diamond 423 70.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora capsici
28319290 28319290 PRJNA909412_P_NODE_5346_length_225_cov_2.935484_g5205_i0 PRJNA909412 5346 225 2.935484 6.604839 Aphanomyces stellatus 120398 SAR_Eukaryotes SAR_Eukaryotes 59.7 2.96e-8   NR KAF0682950.1 120398 g5205 i0 50.8 1.73333333333333 65 31 86.7 1 30 224 5 68 KAF0682950.1 hypothetical protein As57867_024885 [Aphanomyces stellatus] diamond 390 59.7 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
28319291 28319291 PRJNA909412_P_NODE_9506_length_174_cov_2.140741_g9365_i0 PRJNA909412 9506 174 2.140741 3.72488934 Pythium oligandrum 41045 SAR_Eukaryotes SAR_Eukaryotes 63.9 5e-10   NR TMW69019.1 41045 g9365 i0 50 1 58 24 100 1 174 1 285 337 TMW69019.1 hypothetical protein Poli38472_001175 [Pythium oligandrum] diamond 174 63.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
29305501 29305501 PRJNA909412_P_NODE_2609_length_329_cov_3.527586_g2469_i0 PRJNA909412 2609 329 3.527586 11.60575794 Pythium 4797 SAR_Eukaryotes SAR_Eukaryotes 157 3.1e-42   NR TMW56563.1 41045 g2469 i0 80.8 3.61094224924012 99 19 90.3 0 30 326 567 665 TMW56563.1 hypothetical protein Poli38472_006573 [Pythium oligandrum] diamond 1188 157 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
30087560 30087560 PRJNA909412_P_NODE_11352_length_170_cov_1.587786_g11211_i0 PRJNA909412 11352 170 1.587786 2.6992362 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 67 3.77e-11   NR KAJ0400886.1 114742 g11211 i0 59.3 2.85882352941176 54 21 95.3 1 167 6 126 178 KAJ0400886.1 hypothetical protein P43SY_004498 [Pythium insidiosum] diamond 486 67 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
30309293 30309293 PRJNA909412_P_NODE_8312_length_184_cov_3.448276_g8171_i0 PRJNA909412 8312 184 3.448276 6.34482784 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 76.6 5.5e-15   NR KAJ8578052.1 4785 g8171 i0 64.2 1.69565217391304 53 19 86.4 0 24 182 116 168 KAJ8578052.1 hypothetical protein ON010_g1153 [Phytophthora cinnamomi] diamond 312 76.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
30372395 30372395 PRJNA909412_P_NODE_7232_length_196_cov_2.840764_g7091_i0 PRJNA909412 7232 196 2.840764 5.56789744 Pythium oligandrum 41045 SAR_Eukaryotes SAR_Eukaryotes 60.5 1.04e-8   NR TMW56488.1 41045 g7091 i0 59.2 0.75 49 20 75 0 195 49 291 339 TMW56488.1 hypothetical protein Poli38472_006498 [Pythium oligandrum] diamond 147 60.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
30498426 30498426 PRJNA909412_P_NODE_2473_length_338_cov_3.612040_g2333_i0 PRJNA909412 2473 338 3.61204 12.2086952 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 134 5.1e-34   NR KAJ0412157.1 114742 g2333 i0 66 3.21301775147929 97 30 86.1 1 324 34 614 707 KAJ0412157.1 hypothetical protein ATCC90586_005770 [Pythium insidiosum] diamond 1086 134 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
30505886 30505886 PRJNA909412_P_NODE_14293_length_158_cov_1.907563_g14152_i0 PRJNA909412 14293 158 1.907563 3.01394954 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 72.8 1.45e-13   NR XP_009830284.1 112090 g14152 i0 62.7 22.4620253164557 51 19 96.8 0 5 157 128 178 XP_009830284.1 hypothetical protein, variant [Aphanomyces astaci] diamond 3549 73.2 0.994535519125683 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
31864923 31864923 PRJNA909412_P_NODE_1417_length_462_cov_3.458629_g1278_i0 PRJNA909412 1417 462 3.458629 15.97886598 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 164 1.2399999999999998e-47   NR TMW69510.1 41045 g1278 i0 52.1 3.61038961038961 140 67 90.9 0 41 460 2 141 TMW69510.1 hypothetical protein Poli38472_001666 [Pythium oligandrum] diamond 1668 165 0.993939393939394 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
31896724 31896724 PRJNA909412_P_NODE_6077_length_212_cov_3.196532_g5936_i0 PRJNA909412 6077 212 3.196532 6.77664784 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 42.4 0.034   NR KAK1928758.1 4793 g5936 i0 58.3 1.40094339622642 24 10 34 0 9 80 139 162 KAK1928758.1 putative palmitoyltransferase ZDHHC11 [Phytophthora citrophthora] diamond 297 42.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora citrophthora
32047605 32047605 PRJNA909412_P_NODE_2718_length_321_cov_1.336879_g2578_i0 PRJNA909412 2718 321 1.336879 4.29138159 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 92.8 1.43e-19   NR XP_009844135.1 112090 g2578 i0 50.5 6.18691588785047 105 52 98.1 0 2 316 49 153 XP_009844135.1 hypothetical protein H257_17150 [Aphanomyces astaci] diamond 1986 92.8 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
32616839 32616839 PRJNA909412_P_NODE_3060_length_301_cov_3.343511_g2920_i0 PRJNA909412 3060 301 3.343511 10.06396811 Pythium oligandrum 41045 SAR_Eukaryotes SAR_Eukaryotes 77.4 5.12e-14   NR TMW55219.1 41045 g2920 i0 47.9 24.8172757475083 96 50 95.7 0 7 294 1280 1375 TMW55219.1 hypothetical protein Poli38472_013110 [Pythium oligandrum] diamond 7470 77.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;