contig_metadata
9 rows where bioproject = "PRJNA909412", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3441497 | 3441497 | PRJNA909412_P_NODE_1863_length_399_cov_2.166667_g1723_i0 | PRJNA909412 | 1863 | 399 | 2.166667 | 8.64500133 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 636 | 8.299999999999999e-178 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g1723 | i0 | 95.489 | 163.611528822055 | 399 | 16 | 100 | 1 | 1 | 399 | 1808 | 1412 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 65281 | 636 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 5993871 | 5993871 | PRJNA909412_P_NODE_1185_length_515_cov_2.941176_g1048_i0 | PRJNA909412 | 1185 | 515 | 2.941176 | 15.1470564 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 523 | 8.889999999999997e-144 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g1048 | i0 | 89.951 | 240.594174757282 | 408 | 37 | 79 | 3 | 2 | 408 | 1384 | 980 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 123906 | 523 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 5993947 | 5993947 | PRJNA909412_P_NODE_3785_length_270_cov_1.909091_g3644_i0 | PRJNA909412 | 3785 | 270 | 1.909091 | 5.1545457 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 455 | 1.6100000000000002e-123 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g3644 | i0 | 97.037 | 84.9037037037037 | 270 | 8 | 100 | 0 | 1 | 270 | 5153588 | 5153319 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 22924 | 455 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 16193475 | 16193475 | PRJNA909412_P_NODE_1853_length_400_cov_2.445983_g1713_i0 | PRJNA909412 | 1853 | 400 | 2.445983 | 9.783932 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 662 | 0 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g1713 | i0 | 96.725 | 160.4025 | 397 | 13 | 99 | 0 | 4 | 400 | 653 | 257 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 64161 | 662 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 17468997 | 17468997 | PRJNA909412_P_NODE_6194_length_211_cov_0.953488_g6053_i0 | PRJNA909412 | 6194 | 211 | 0.953488 | 2.01185968 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 379 | 7.489999999999999e-101 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g6053 | i0 | 99.052 | 119.284360189573 | 211 | 2 | 100 | 0 | 1 | 211 | 664 | 874 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 25169 | 379 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 19100684 | 19100684 | PRJNA909412_P_NODE_11135_length_171_cov_3.272727_g10994_i0 | PRJNA909412 | 11135 | 171 | 3.272727 | 5.59636317 | Prosthecobacter | 48463 | Bacteria | Bacteria | 316 | 4.6e-82 | NTclustered | gi|219846433|ref|NR_026024.1| | 48464 | g10994 | i0 | 100 | 100.005847953216 | 171 | 0 | 100 | 0 | 1 | 171 | 1230 | 1060 | Prosthecobacter fusiformis strain FC4 16S ribosomal RNA, partial sequence | blastn | 17101 | 316 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter fusiformis | |
| 20375526 | 20375526 | PRJNA909412_P_NODE_6776_length_202_cov_2.355828_g6635_i0 | PRJNA909412 | 6776 | 202 | 2.355828 | 4.75877256 | Bacteria | 2 | Bacteria | Bacteria | 122 | 2.75e-30 | NR | MBT8037638.1 | 2499141 | g6635 | i0 | 80.6 | 9.93564356435644 | 67 | 13 | 99.5 | 0 | 2 | 202 | 624 | 690 | MBT8037638.1 aminomethyl-transferring glycine dehydrogenase [Verrucomicrobiia bacterium] | diamond | 2007 | 122 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 28571882 | 28571882 | PRJNA909412_P_NODE_16767_length_151_cov_2.482143_g16626_i0 | PRJNA909412 | 16767 | 151 | 2.482143 | 3.74803593 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 67.8 | 1.12e-11 | NR | MEP6809396.1 | 2201154 | g16626 | i0 | 61.7 | 0.933774834437086 | 47 | 18 | 93.4 | 0 | 142 | 2 | 119 | 165 | MEP6809396.1 arginine deiminase-related protein [Chthoniobacterales bacterium] | diamond | 141 | 67.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 29298169 | 29298169 | PRJNA909412_P_NODE_11949_length_165_cov_1.936508_g11808_i0 | PRJNA909412 | 11949 | 165 | 1.936508 | 3.1952382 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 82.8 | 7.49e-17 | NR | MCB1120004.1 | 2499141 | g11808 | i0 | 82 | 2.72727272727273 | 50 | 9 | 90.9 | 0 | 3 | 152 | 125 | 174 | MCB1120004.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase [Verrucomicrobiia bacterium] | diamond | 450 | 82.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;