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contig_metadata

12 rows where bioproject = "PRJNA909412", tax_clade = "Discoba" and tax_phylum = "Heterolobosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 12 ✖

tax_clade 1

  • Discoba · 12 ✖

bioproject 1

  • PRJNA909412 · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2165960 2165960 PRJNA909412_P_NODE_10502_length_172_cov_2.879699_g10361_i0 PRJNA909412 10502 172 2.879699 4.95308228 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 95.3 2.36e-15   NTclustered gi|2119416825|ref|XM_044686971.1| 51637 g10361 i0 87.654 9.09883720930233 81 10 47 0 1 81 579 659 Naegleria lovaniensis uncharacterized protein (C9374_011328), partial mRNA blastn 1565 95.3 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
4719238 4719238 PRJNA909412_P_NODE_664_length_692_cov_3.442573_g568_i0 PRJNA909412 664 692 3.442573 23.82260516 root 1 Root_unresolved Root_unresolved 148 8.699999999999999e-38   NR XP_044563609.1 5763 g568 i0 63 4.23988439306358 119 44 51.6 0 358 2 112 230 XP_044563609.1 uncharacterized protein FDP41_001966 [Naegleria fowleri] diamond 2934 148 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
17468907 17468907 PRJNA909412_P_NODE_11974_length_165_cov_1.309524_g11833_i0 PRJNA909412 11974 165 1.309524 2.1607146 Naegleria australiensis 51634 Heterolobosea other_Eukaryota 300 4.46e-77   NTclustered gi|2476253407|gb|OQ627480.1| 51634 g11833 i0 99.394 27.7212121212121 165 1 100 0 1 165 2676 2512 Naegleria australiensis strain PP397 rDNA-containing extrachromosomal element genomic sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 4574 300 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
22567831 22567831 PRJNA909412_P_NODE_5278_length_227_cov_2.106383_g5137_i0 PRJNA909412 5278 227 2.106383 4.78148941 Parafumarolamoeba stagnalis 2872509 Heterolobosea other_Eukaryota 267 6.63e-67   NTclustered gi|2086087549|gb|MZ919148.1| 2872509 g5137 i0 87.826 3.04845814977974 230 25 100 3 1 227 805 576 Parafumarolamoeba stagnalis small subunit ribosomal RNA gene, partial sequence blastn 692 267 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Parafumarolamoeba Parafumarolamoeba stagnalis
23842941 23842941 PRJNA909412_P_NODE_3259_length_291_cov_3.218254_g3118_i0 PRJNA909412 3259 291 3.218254 9.36511914 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 132 3.37e-26   NTclustered gi|290996811|ref|XM_002680930.1| 5762 g3118 i0 83.803 3.6254295532646 142 19 48 4 128 267 1611 1472 Naegleria gruberi aldehyde dehydrogenase (NAEGRDRAFT_35633), mRNA blastn 1055 132 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
25116755 25116755 PRJNA909412_P_NODE_5580_length_221_cov_1.730769_g5439_i0 PRJNA909412 5580 221 1.730769 3.82499949 Naegleria pringsheimi 234921 Heterolobosea other_Eukaryota 409 1.0100000000000001e-109   NTclustered gi|2515557648|gb|OR045415.1| 234921 g5439 i0 100 50.4932126696833 221 0 100 0 1 221 4003 4223 Naegleria pringsheimi strain Singh(s) rDNA-containing extrachromosomal element genomic sequence; 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 11159 409 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria pringsheimi
27309113 27309113 PRJNA909412_P_NODE_6923_length_200_cov_2.310559_g6782_i0 PRJNA909412 6923 200 2.310559 4.621118 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 45.4 0.00229   NR XP_002674994.1 5762 g6782 i0 41.8 0.825 55 29 82.5 1 4 168 31 82 XP_002674994.1 uncharacterized protein NAEGRDRAFT_83230 [Naegleria gruberi] diamond 165 45.4 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
27348153 27348153 PRJNA909412_P_NODE_1963_length_386_cov_2.066282_g1823_i0 PRJNA909412 1963 386 2.066282 7.97584852 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 131 1.9e-32   NR XP_044552355.1 51637 g1823 i0 63 8.75129533678756 92 34 71.5 0 276 1 148 239 XP_044552355.1 uncharacterized protein C9374_000527 [Naegleria lovaniensis] diamond 3378 132 0.992424242424242 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
27372437 27372437 PRJNA909412_P_NODE_8943_length_179_cov_0.900000_g8802_i0 PRJNA909412 8943 179 0.9 1.611 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 50.1 3.35e-5   NR XP_044561931.1 5763 g8802 i0 40.3 1.0391061452514 62 33 97.2 3 2 175 51 112 XP_044561931.1 uncharacterized protein FDP41_003871 [Naegleria fowleri] diamond 186 50.1 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
27506046 27506046 PRJNA909412_P_NODE_3463_length_282_cov_2.263374_g3322_i0 PRJNA909412 3463 282 2.263374 6.38271468 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 44.7 0.0123   NR XP_002675781.1 5762 g3322 i0 31.3 3.11702127659574 67 46 71.3 0 13 213 218 284 XP_002675781.1 leucine-rich repeat-containing protein [Naegleria gruberi] diamond 879 44.7 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30309292 30309292 PRJNA909412_P_NODE_6572_length_205_cov_1.518072_g6431_i0 PRJNA909412 6572 205 1.518072 3.1120476 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 88.6 6.78e-21   NR XP_044554157.1 51637 g6431 i0 84.3 0.746341463414634 51 8 74.6 0 201 49 56 106 XP_044554157.1 uncharacterized protein C9374_012515 [Naegleria lovaniensis] diamond 153 88.6 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
32023375 32023375 PRJNA909412_P_NODE_1158_length_519_cov_4.079167_g1026_i0 PRJNA909412 1158 519 4.079167 21.17087673 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 172 3.44e-50   NR XP_002673010.1 5762 g1026 i0 58.1 5.36416184971098 155 60 89.6 3 515 51 130 279 XP_002673010.1 uncharacterized protein NAEGRDRAFT_81026 [Naegleria gruberi] diamond 2784 172 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;