RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA908278", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Thermoproteota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA908278 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27056094 27056094 PRJNA908278_P_NODE_25002_length_259_cov_1.091398_g24899_i0 PRJNA908278 25002 259 1.091398 2.82672082 Thermoproteota archaeon 2056631 Archaea Archaea 41.2 0.0357   NR RLG39980.1 2056631 g24899 i0 50 0.370656370656371 32 16 37.1 0 159 64 30 61 RLG39980.1 MAG: hypothetical protein DRN78_06030 [Thermoproteota archaeon] diamond 96 41.2 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
27593275 27593275 PRJNA908278_P_NODE_21244_length_281_cov_1.110577_g21141_i0 PRJNA908278 21244 281 1.110577 3.12072137 Thermoprotei archaeon 2250277 Archaea Archaea 98.6 6.11e-23   NR RLE57769.1 2250277 g21141 i0 58.8 0.854092526690391 80 33 85.4 0 241 2 8 87 RLE57769.1 MAG: proteasome endopeptidase complex, archaeal, alpha subunit [Thermoprotei archaeon] diamond 240 98.6 1 Archaea   Thermoproteati Thermoproteota Thermoprotei       Thermoprotei archaeon
32023359 32023359 PRJNA908278_P_NODE_21598_length_279_cov_1.165049_g21495_i0 PRJNA908278 21598 279 1.165049 3.25048671 root 1 Root_unresolved Root_unresolved 43.1 0.0405   NR MDK2383995.1 2056631 g21495 i0 51.1 1.70967741935484 45 22 48.4 0 135 1 224 268 MDK2383995.1 phosphate ABC transporter substrate-binding protein PstS [Thermoproteota archaeon] diamond 477 43.1 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;