contig_metadata
9 rows where bioproject = "PRJNA908278" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27695599 | 27695599 | PRJNA908278_P_NODE_31964_length_245_cov_0.895349_g31861_i0 | PRJNA908278 | 31964 | 245 | 0.895349 | 2.19360505 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 77.8 | 1.47e-14 | NR | MCC7055219.1 | 2026741 | g31861 | i0 | 54.9 | 3.68571428571429 | 71 | 27 | 80.8 | 1 | 40 | 237 | 299 | 369 | MCC7055219.1 alkaline phosphatase family protein [Gemmatimonadaceae bacterium] | diamond | 903 | 77.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 29179444 | 29179444 | PRJNA908278_P_NODE_9809_length_385_cov_6.608974_g9706_i0 | PRJNA908278 | 9809 | 385 | 6.608974 | 25.4445499 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 78.2 | 3.96e-14 | NR | MBK6304481.1 | 2026742 | g9706 | i0 | 49.4 | 1.77662337662338 | 83 | 41 | 63.9 | 1 | 136 | 381 | 44 | 126 | MBK6304481.1 beta-lactamase family protein [Gemmatimonadota bacterium] | diamond | 684 | 78.6 | 0.994910941475827 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 29235015 | 29235015 | PRJNA908278_P_NODE_25149_length_258_cov_1.248649_g25046_i0 | PRJNA908278 | 25149 | 258 | 1.248649 | 3.22151442 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 125 | 7.089999999999998e-32 | NR | MFQ5705264.1 | 2448054 | g25046 | i0 | 68.6 | 3 | 86 | 27 | 100 | 0 | 258 | 1 | 193 | 278 | MFQ5705264.1 aldehyde dehydrogenase family protein [Gemmatimonadales bacterium] | diamond | 774 | 125 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 29519070 | 29519070 | PRJNA908278_P_NODE_14910_length_326_cov_1.217391_g14807_i0 | PRJNA908278 | 14910 | 326 | 1.217391 | 3.96869466 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 106 | 1.8999999999999998e-24 | NR | MBA3579866.1 | 2026741 | g14807 | i0 | 54.2 | 0.984662576687117 | 107 | 43 | 98.5 | 2 | 3 | 323 | 329 | 429 | MBA3579866.1 M20/M25/M40 family metallo-hydrolase [Gemmatimonadaceae bacterium] | diamond | 321 | 106 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 29866510 | 29866510 | PRJNA908278_P_NODE_27131_length_250_cov_1.604520_g27028_i0 | PRJNA908278 | 27131 | 250 | 1.60452 | 4.0113 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 42.7 | 0.034 | NR | HEY7193298.1 | 2448054 | g27028 | i0 | 32.9 | 1.836 | 82 | 50 | 94.8 | 3 | 245 | 9 | 5 | 84 | HEY7193298.1 hypothetical protein [Gemmatimonadales bacterium] | diamond | 459 | 42.7 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 29992900 | 29992900 | PRJNA908278_P_NODE_19211_length_292_cov_1.406393_g19108_i0 | PRJNA908278 | 19211 | 292 | 1.406393 | 4.10666756 | Longimicrobium sp. | 2029185 | Bacteria | Bacteria | 86.3 | 2.3e-17 | NR | HEX2211276.1 | 2029185 | g19108 | i0 | 54 | 2.68150684931507 | 87 | 34 | 88.4 | 3 | 1 | 258 | 214 | 295 | HEX2211276.1 hypothetical protein [Longimicrobium sp.] | diamond | 783 | 86.3 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium sp. | |
| 31129917 | 31129917 | PRJNA908278_P_NODE_29715_length_247_cov_1.770115_g29612_i0 | PRJNA908278 | 29715 | 247 | 1.770115 | 4.37218405 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 57.8 | 1.94e-7 | NR | MBS1241634.1 | 2026742 | g29612 | i0 | 46.2 | 5.1497975708502 | 78 | 36 | 94.7 | 3 | 1 | 234 | 293 | 364 | MBS1241634.1 peptidase family protein [Gemmatimonadota bacterium] | diamond | 1272 | 57.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 31478266 | 31478266 | PRJNA908278_P_NODE_20316_length_286_cov_1.305164_g20213_i0 | PRJNA908278 | 20316 | 286 | 1.305164 | 3.73276904 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 57.4 | 3.42e-7 | NR | MFN2567339.1 | 2026741 | g20213 | i0 | 48.2 | 0.587412587412587 | 56 | 29 | 58.7 | 0 | 112 | 279 | 86 | 141 | MFN2567339.1 alpha/beta fold hydrolase [Gemmatimonadaceae bacterium] | diamond | 168 | 57.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 32079047 | 32079047 | PRJNA908278_P_NODE_1138_length_983_cov_5.060440_g1071_i0 | PRJNA908278 | 1138 | 983 | 5.06044 | 49.7441252 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 251 | 2.01e-74 | NR | NNE08319.1 | 2026742 | g1071 | i0 | 42.6 | 1.81586978636826 | 298 | 151 | 88.5 | 7 | 876 | 7 | 41 | 326 | NNE08319.1 T9SS type A sorting domain-containing protein [Gemmatimonadota bacterium] | diamond | 1785 | 251 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;