RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA908278", tax_phylum = "Candidatus Rokuibacteriota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

  • Candidatus Rokuibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA908278 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28098204 28098204 PRJNA908278_P_NODE_14885_length_326_cov_1.308300_g14782_i0 PRJNA908278 14885 326 1.3083 4.265058 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 60.1 7.35e-8   NR MBI4588610.1 2053607 g14782 i0 46.8 1.84049079754601 62 33 57.1 0 28 213 200 261 MBI4588610.1 ketoacyl-ACP synthase III [Candidatus Rokuibacteriota bacterium] diamond 600 60.1 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
29581954 29581954 PRJNA908278_P_NODE_9430_length_391_cov_2.949686_g9327_i0 PRJNA908278 9430 391 2.949686 11.53327226 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 113 1.07e-28   NR PYM83509.1 2053607 g9327 i0 50.4 1.94884910485934 127 55 97.4 2 8 388 6 124 PYM83509.1 MAG: hypothetical protein DME09_10715 [Candidatus Rokuibacteriota bacterium] diamond 762 113 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;