RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA908278" and tax_phylum = "Candidatus Rifleibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rifleibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA908278 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8543205 8543205 PRJNA908278_P_NODE_24207_length_263_cov_1.621053_g24104_i0 PRJNA908278 24207 263 1.621053 4.26336939 Candidatus Rifleibacterium amylolyticum 2760816 Bacteria Bacteria 90.1 7.11e-19   NR KAF1081366.1 2760816 g24104 i0 57.1 0.958174904942966 84 34 95.8 1 253 2 1 82 KAF1081366.1 MAG: ATP citrate synthase, alpha chain [Candidatus Rifleibacterium amylolyticum] diamond 252 90.1 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota       Candidatus Rifleibacterium Candidatus Rifleibacterium amylolyticum
28698378 28698378 PRJNA908278_P_NODE_10607_length_373_cov_2.543333_g10504_i0 PRJNA908278 10607 373 2.543333 9.48663209 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 45.1 0.0147   NR MBF0503180.1 2053586 g10504 i0 35.4 0.522788203753351 65 36 48.3 2 372 193 51 114 MBF0503180.1 hypothetical protein [Candidatus Rifleibacteriota bacterium] diamond 195 45.1 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium
32269164 32269164 PRJNA908278_P_NODE_17638_length_304_cov_1.000000_g17535_i0 PRJNA908278 17638 304 1 3.04 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 47.8 0.00118   NR MFC1742831.1 2053586 g17535 i0 46.3 0.404605263157895 41 22 40.5 0 9 131 202 242 MFC1742831.1 tetratricopeptide repeat protein [Candidatus Rifleibacteriota bacterium] diamond 123 47.8 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;