RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA908278" and tax_phylum = "Candidatus Parcubacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Parcubacteria · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA908278 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4718692 4718692 PRJNA908278_P_NODE_14524_length_329_cov_2.027344_g14421_i0 PRJNA908278 14524 329 2.027344 6.66996176 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 57.4 6.68e-8   NR MCK5062224.1 2762014 g14421 i0 44 0.765957446808511 84 42 76.6 2 12 263 14 92 MCK5062224.1 50S ribosomal protein L17 [Candidatus Parcubacteria bacterium] diamond 252 57.4 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
28603550 28603550 PRJNA908278_P_NODE_20287_length_286_cov_1.446009_g20184_i0 PRJNA908278 20287 286 1.446009 4.13558574 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 118 1.14e-28   NR MCX6743718.1 2762014 g20184 i0 62.1 2.98951048951049 95 36 99.7 0 286 2 172 266 MCX6743718.1 nicotinate phosphoribosyltransferase [Candidatus Parcubacteria bacterium] diamond 855 118 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;