RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA908278" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA908278 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26929476 26929476 PRJNA908278_P_NODE_11022_length_368_cov_1.562712_g10919_i0 PRJNA908278 11022 368 1.562712 5.75078016 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 149 5.529999999999998e-42   NR HLE42455.1 2072417 g10919 i0 58.4 3.68478260869565 113 47 92.1 0 368 30 141 253 HLE42455.1 phytanoyl-CoA dioxygenase family protein [Candidatus Methylomirabilota bacterium] diamond 1356 149 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
27537482 27537482 PRJNA908278_P_NODE_15043_length_325_cov_0.773810_g14940_i0 PRJNA908278 15043 325 0.77381 2.5148825 Bacteria 2 Bacteria Bacteria 150 6.77e-41   NR HTO82366.1 2072417 g14940 i0 64.8 5.98153846153846 108 38 99.7 0 1 324 247 354 HTO82366.1 aspartate aminotransferase family protein [Candidatus Methylomirabilota bacterium] diamond 1944 151 0.993377483443709 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;