RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA908278" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA908278 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11094017 11094017 PRJNA908278_P_NODE_4889_length_524_cov_0.984479_g4786_i0 PRJNA908278 4889 524 0.984479 5.15866996 Pseudomonadati 3379134 Bacteria Bacteria 191 1.59e-57   NR MDP6053433.1 2053570 g4786 i0 61.1 5.70229007633588 157 58 89.9 2 52 522 29 182 MDP6053433.1 dipeptidase [Candidatus Latescibacterota bacterium] diamond 2988 192 0.994791666666667 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
28066689 28066689 PRJNA908278_P_NODE_2905_length_661_cov_1.554422_g2802_i0 PRJNA908278 2905 661 1.554422 10.27472942 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 186 1.88e-52   NR UCE02019.1 2053570 g2802 i0 43.6 0.998487140695915 220 115 99.4 4 658 2 107 318 UCE02019.1 MAG: hypothetical protein JSW67_12250 [Candidatus Latescibacterota bacterium] diamond 660 186 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;