RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA908278" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA908278 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26683518 26683518 PRJNA908278_P_NODE_10741_length_372_cov_0.929766_g10638_i0 PRJNA908278 10741 372 0.929766 3.45872952 Pseudomonadati 3379134 Bacteria Bacteria 78.6 9.28e-16   NR MFN2424835.1 2838779 g10638 i0 65.5 2.88709677419355 58 18 45.2 1 197 364 4 61 MFN2424835.1 nuclear transport factor 2 family protein [Candidatus Binatia bacterium] diamond 1074 79 0.994936708860759 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
27971938 27971938 PRJNA908278_P_NODE_1065_length_1008_cov_5.408556_g1000_i0 PRJNA908278 1065 1008 5.408556 54.51824448 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 189 9.17e-51   NR MBY0276389.1 2838779 g1000 i0 39.9 1.92559523809524 318 182 93.2 6 952 14 25 338 MBY0276389.1 hypothetical protein [Candidatus Binatia bacterium] diamond 1941 189 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
28389861 28389861 PRJNA908278_P_NODE_10986_length_368_cov_3.979661_g10883_i0 PRJNA908278 10986 368 3.979661 14.64515248 Pseudomonadati 3379134 Bacteria Bacteria 67.8 1.79e-11   NR HZP41530.1 2838779 g10883 i0 42.2 2.625 109 58 88.9 2 328 2 16 119 HZP41530.1 MAPEG family protein [Candidatus Binatia bacterium] diamond 966 67.8 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31319879 31319879 PRJNA908278_P_NODE_27475_length_250_cov_0.870056_g27372_i0 PRJNA908278 27475 250 0.870056 2.17514 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 64.7 7.27e-10   NR HJY82211.1 2838779 g27372 i0 39 1.98 82 48 96 1 2 241 245 326 HJY82211.1 MFS transporter [Candidatus Binatia bacterium] diamond 495 64.7 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;