RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA908278", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJNA908278 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28192818 28192818 PRJNA908278_P_NODE_7626_length_428_cov_2.315493_g7523_i0 PRJNA908278 7626 428 2.315493 9.91031004 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 72.4 1.32e-11   NR HLZ94098.1 2052315 g7523 i0 37.3 7.04439252336449 142 83 98.8 4 6 428 1828 1964 HLZ94098.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 3015 72.4 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
28729823 28729823 PRJNA908278_P_NODE_15247_length_323_cov_1.232000_g15144_i0 PRJNA908278 15247 323 1.232 3.97936 Candidatus Dormibacterales bacterium 3127010 Bacteria Bacteria 53.1 8.59e-6   NR MFI5284126.1 3127010 g15144 i0 48.4 1.11455108359133 62 32 57.6 0 191 6 8 69 MFI5284126.1 hypothetical protein [Candidatus Dormibacterales bacterium] diamond 360 53.1 1 Bacteria   Bacillati Candidatus Dormiibacterota Candidatus Dormibacteria Candidatus Dormibacterales     Candidatus Dormibacterales bacterium
30182346 30182346 PRJNA908278_P_NODE_28732_length_249_cov_0.875000_g28629_i0 PRJNA908278 28732 249 0.875 2.17875 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 125 3.7299999999999998e-31   NR HET9410559.1 2052315 g28629 i0 72.8 0.975903614457831 81 22 97.6 0 247 5 527 607 HET9410559.1 S9 family peptidase [Candidatus Dormiibacterota bacterium] diamond 243 125 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;