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contig_metadata

7 rows where bioproject = "PRJNA908278", tax_clade = "Stenosarchaea group" and tax_phylum = "Methanobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 7 ✖

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 7 ✖

bioproject 1

  • PRJNA908278 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27340609 27340609 PRJNA908278_P_NODE_23103_length_270_cov_1.172589_g23000_i0 PRJNA908278 23103 270 1.172589 3.1659903 Methanoregula sp. 2052170 Archaea Archaea 54.3 4.15e-6   NR WAC05271.1 2052170 g23000 i0 51.9 4.16666666666667 54 24 57.8 1 236 81 25 78 WAC05271.1 MAG: NADP-dependent malic enzyme [Methanoregula sp.] diamond 1125 54.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
27529944 27529944 PRJNA908278_P_NODE_30483_length_247_cov_0.885057_g30380_i0 PRJNA908278 30483 247 0.885057 2.18609079 Methanosarcinaceae archaeon 1945595 Archaea Archaea 57 1.81e-7   NR HJH32543.1 1945595 g30380 i0 58.7 1.65182186234818 46 19 55.9 0 143 6 6 51 HJH32543.1 DUF2589 domain-containing protein [Methanosarcinaceae archaeon] diamond 408 57 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae   Methanosarcinaceae archaeon
27561296 27561296 PRJNA908278_P_NODE_1264_length_948_cov_2.958857_g1188_i0 PRJNA908278 1264 948 2.958857 28.04996436 Methanosaeta sp. PtaB.Bin 90426 Archaea Archaea 134 1.12e-30   NR OPX78749.1 1811685 g1188 i0 38.3 1.34177215189873 222 122 68.7 6 931 281 2067 2278 OPX78749.1 MAG: HYR domain protein [Methanosaeta sp. PtaB.Bin039] diamond 1272 134 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanosaeta sp. PtaB.Bin039
27727272 27727272 PRJNA908278_P_NODE_21564_length_279_cov_1.388350_g21461_i0 PRJNA908278 21564 279 1.38835 3.8734965 root 1 Root_unresolved Root_unresolved 42.7 0.0213   NR MCX6700790.1 2184052 g21461 i0 42.9 1.41935483870968 49 26 50.5 1 257 117 25 73 MCX6700790.1 thioredoxin family protein [Methanomicrobiales archaeon] diamond 396 43.1 0.990719257540603 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales     Methanomicrobiales archaeon
28414152 28414152 PRJNA908278_P_NODE_21846_length_277_cov_2.088235_g21743_i0 PRJNA908278 21846 277 2.088235 5.78441095 Methanosarcinales archaeon 2250255 Archaea Archaea 53.9 4.65e-6   NR RYE82592.1 2250255 g21743 i0 41.1 0.790613718411552 73 35 70.4 4 79 273 149 221 RYE82592.1 MAG: hypothetical protein EOO65_05280 [Methanosarcinales archaeon] diamond 219 53.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
30435424 30435424 PRJNA908278_P_NODE_30673_length_246_cov_1.335260_g30570_i0 PRJNA908278 30673 246 1.33526 3.2847396 Methanosarcinales archaeon 2250255 Archaea Archaea 67.8 2.31e-11   NR RYE82592.1 2250255 g30570 i0 50 0.75609756097561 62 30 74.4 1 185 3 150 211 RYE82592.1 MAG: hypothetical protein EOO65_05280 [Methanosarcinales archaeon] diamond 186 67.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
32142464 32142464 PRJNA908278_P_NODE_13838_length_336_cov_1.403042_g13735_i0 PRJNA908278 13838 336 1.403042 4.71422112 Haloprofundus sp. MHR1 2572921 Archaea Archaea 60.5 5.77e-8   NR WP_137048893.1 2572921 g13735 i0 43.5 1.625 85 45 75.9 2 80 334 256 337 WP_137048893.1 ferritin-like domain-containing protein [Haloprofundus sp. MHR1] diamond 546 60.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloprofundus Haloprofundus sp. MHR1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;