RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA908278", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Woeseibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Woeseibacteriota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA908278 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5993565 5993565 PRJNA908278_P_NODE_30085_length_247_cov_0.885057_g29982_i0 PRJNA908278 30085 247 0.885057 2.18609079 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 52.8 0.022   NTclustered gi|1950819513|gb|CP066693.1| 2026804 g29982 i0 100 0.11336032388664 28 0 11 0 31 58 315442 315415 MAG: Candidatus Woesebacteria bacterium isolate NC_groundwater_896_Pr1_S2p5_35_35 chromosome blastn 28 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
27688206 27688206 PRJNA908278_P_NODE_12924_length_345_cov_1.474265_g12821_i0 PRJNA908278 12924 345 1.474265 5.08621425 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 81.6 5.42e-16   NR HRN71286.1 2026804 g12821 i0 50.6 0.669565217391304 77 38 67 0 2 232 54 130 HRN71286.1 hypothetical protein [Candidatus Woesebacteria bacterium] diamond 231 81.6 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
30719431 30719431 PRJNA908278_P_NODE_15634_length_320_cov_0.914980_g15531_i0 PRJNA908278 15634 320 0.91498 2.927936 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 75.5 8.62e-14   NR HRN71286.1 2026804 g15531 i0 39.8 0.965625 103 59 95.6 2 2 307 53 153 HRN71286.1 hypothetical protein [Candidatus Woesebacteria bacterium] diamond 309 75.5 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
30884943 30884943 PRJNA908278_P_NODE_26774_length_251_cov_0.865169_g26671_i0 PRJNA908278 26774 251 0.865169 2.17157419 Pseudomonadati 3379134 Bacteria Bacteria 104 2.92e-27   NR MBP9798444.1 2026804 g26671 i0 69.6 2.46215139442231 69 21 82.5 0 44 250 1 69 MBP9798444.1 hypothetical protein [Candidatus Woesebacteria bacterium] diamond 618 104 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;