RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA908278", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Poribacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA908278 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27916160 27916160 PRJNA908278_P_NODE_32045_length_245_cov_0.895349_g31942_i0 PRJNA908278 32045 245 0.895349 2.19360505 Bacillati 1783272 Bacteria Bacteria 72 8.34e-13   NR MDA1191601.1 2026781 g31942 i0 35.8 6.95510204081633 81 50 99.2 1 2 244 5 83 MDA1191601.1 phytanoyl-CoA dioxygenase family protein [Candidatus Poribacteria bacterium] diamond 1704 72.4 0.994475138121547 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
29053110 29053110 PRJNA908278_P_NODE_35108_length_241_cov_0.916667_g35005_i0 PRJNA908278 35108 241 0.916667 2.20916747 Pseudomonadati 3379134 Bacteria Bacteria 82.4 3.09e-16   NR GIX06271.1 2026781 g35005 i0 50 5.83817427385892 80 40 99.6 0 240 1 277 356 GIX06271.1 MAG: hypothetical protein KatS3mg115_0674 [Candidatus Poribacteria bacterium] diamond 1407 82.4 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
29644985 29644985 PRJNA908278_P_NODE_18030_length_301_cov_1.013158_g17927_i0 PRJNA908278 18030 301 1.013158 3.04960558 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 76.3 1.26e-13   NR MBM3214625.1 2026781 g17927 i0 46.8 0.787375415282392 79 39 77.7 2 301 68 388 464 MBM3214625.1 choice-of-anchor C family protein [Candidatus Poribacteria bacterium] diamond 237 76.3 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;