RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA908278", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Doudnaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Doudnaibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA908278 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29747322 29747322 PRJNA908278_P_NODE_6110_length_474_cov_2.840399_g6007_i0 PRJNA908278 6110 474 2.840399 13.46349126 Bacillati 1783272 Bacteria Bacteria 82.8 7.08e-16   NR MBX4186696.1 2052150 g6007 i0 33.6 3.67721518987342 128 85 81 0 400 17 39 166 MBX4186696.1 SIMPL domain-containing protein [Candidatus Doudnabacteria bacterium] diamond 1743 83.6 0.990430622009569 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium
31573169 31573169 PRJNA908278_P_NODE_1936_length_793_cov_4.202778_g1846_i0 PRJNA908278 1936 793 4.202778 33.32802954 Candidatus Doudnabacteria bacterium 2052150 Bacteria Bacteria 115 5.190000000000001e-27   NR MBL8030819.1 2052150 g1846 i0 35.4 0.737704918032787 195 123 73 2 714 136 50 243 MBL8030819.1 SIMPL domain-containing protein [Candidatus Doudnabacteria bacterium] diamond 585 115 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;