RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA906294" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA906294 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31224867 31224867 PRJNA906294_P_NODE_154655_length_305_cov_1.336207_g150539_i0 PRJNA906294 154655 305 1.336207 4.07543135 Ignavibacteria bacterium 2053306 Bacteria Bacteria 63.5 3.61e-9   NR MDP3582939.1 2053306 g150539 i0 38.5 2.05573770491803 104 50 99.3 3 1 303 140 232 MDP3582939.1 glycoside hydrolase family 125 protein [Ignavibacteria bacterium] diamond 627 63.5 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
31573110 31573110 PRJNA906294_P_NODE_190116_length_265_cov_1.442708_g186000_i0 PRJNA906294 190116 265 1.442708 3.8231762 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 42.7 0.0492   NR MBI5647215.1 2026749 g186000 i0 43.6 0.622641509433962 55 27 60 2 41 199 518 570 MBI5647215.1 VWA domain-containing protein [Ignavibacteriota bacterium] diamond 165 42.7 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;