RNAquarium Metadata Server
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contig_metadata

14 rows where bioproject = "PRJNA906294" and tax_phylum = "Endomyxa"

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tax_superkingdom 1

tax_phylum 1

  • Endomyxa · 14 ✖

tax_clade 1

bioproject 1

  • PRJNA906294 · 14 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7267729 7267729 PRJNA906294_P_NODE_79186_length_496_cov_5.640662_g75076_i0 PRJNA906294 79186 496 5.640662 27.97768352 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 226 4.0700000000000005e-73   NR CEP00218.1 37360 g75076 i0 70.3 2.83064516129032 155 43 91.9 1 461 6 7 161 CEP00218.1 hypothetical protein PBRA_007952 [Plasmodiophora brassicae] diamond 1404 226 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
8539779 8539779 PRJNA906294_P_NODE_168487_length_288_cov_1.316279_g164371_i0 PRJNA906294 168487 288 1.316279 3.79088352 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 166 3.87e-47   NR SPQ96286.1 37360 g164371 i0 86.3 1.97916666666667 95 13 99 0 287 3 107 201 SPQ96286.1 unnamed protein product [Plasmodiophora brassicae] diamond 570 166 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
14002875 14002875 PRJNA906294_P_NODE_59731_length_616_cov_3.970534_g55668_i0 PRJNA906294 59731 616 3.970534 24.45848944 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 210 1.76e-65   NR CEP02281.1 37360 g55668 i0 59.3 6.7012987012987 194 76 94.5 2 1 582 11 201 CEP02281.1 hypothetical protein PBRA_008865 [Plasmodiophora brassicae] diamond 4128 212 0.990566037735849 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
21287711 21287711 PRJNA906294_P_NODE_122197_length_359_cov_1.062937_g118081_i0 PRJNA906294 122197 359 1.062937 3.81594383 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 96.7 1.8899999999999998e-20   NR SPQ99257.1 37360 g118081 i0 42.9 0.877437325905292 105 59 87.7 1 38 352 1659 1762 SPQ99257.1 unnamed protein product [Plasmodiophora brassicae] diamond 315 96.7 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
25113782 25113782 PRJNA906294_P_NODE_205420_length_250_cov_1.700565_g201304_i0 PRJNA906294 205420 250 1.700565 4.2514125 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 127 2.69e-35   NR CEP02737.1 37360 g201304 i0 69.9 0.996 83 25 99.6 0 249 1 51 133 CEP02737.1 hypothetical protein PBRA_002705 [Plasmodiophora brassicae] diamond 249 127 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
27277333 27277333 PRJNA906294_P_NODE_214903_length_246_cov_2.098266_g210787_i0 PRJNA906294 214903 246 2.098266 5.16173436 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 107 2.09e-25   NR CEP02402.1 37360 g210787 i0 63.8 0.975609756097561 80 28 97.6 1 2 241 304 382 CEP02402.1 hypothetical protein PBRA_008986 [Plasmodiophora brassicae] diamond 240 107 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
28168902 28168902 PRJNA906294_P_NODE_192185_length_263_cov_1.368421_g188069_i0 PRJNA906294 192185 263 1.368421 3.59894723 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 91.7 1.58e-19   NR MES1919342.1 126728 g188069 i0 45.7 8.29277566539924 81 44 92.4 0 244 2 285 365 MES1919342.1 Actin, cytoplasmic A3a [Bonamia ostreae] diamond 2181 91.7 1 Eukaryota Sar   Endomyxa Ascetosporea Haplosporida   Bonamia Bonamia ostreae
28255957 28255957 PRJNA906294_P_NODE_170046_length_286_cov_1.516432_g165930_i0 PRJNA906294 170046 286 1.516432 4.33699552 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 58.5 1.36e-8   NR CEO94225.1 37360 g165930 i0 54.2 1.77272727272727 48 22 50.3 0 284 141 28 75 CEO94225.1 hypothetical protein PBRA_000010 [Plasmodiophora brassicae] diamond 507 58.5 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
28295120 28295120 PRJNA906294_P_NODE_130986_length_342_cov_1.100372_g126870_i0 PRJNA906294 130986 342 1.100372 3.76327224 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 45.8 0.00762   NR CEO99991.1 37360 g126870 i0 44.9 1.79824561403509 49 27 43 0 333 187 134 182 CEO99991.1 hypothetical protein PBRA_007725 [Plasmodiophora brassicae] diamond 615 45.8 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
29866447 29866447 PRJNA906294_P_NODE_202831_length_252_cov_2.877095_g198715_i0 PRJNA906294 202831 252 2.877095 7.2502794 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 64.3 1.34e-11   NR CEO98595.1 37360 g198715 i0 63.5 0.619047619047619 52 19 61.9 0 247 92 1 52 CEO98595.1 hypothetical protein PBRA_006708 [Plasmodiophora brassicae] diamond 156 64.3 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
30316736 30316736 PRJNA906294_P_NODE_123072_length_357_cov_1.475352_g118956_i0 PRJNA906294 123072 357 1.475352 5.26700664 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 77.4 4.22e-14   NR CEO99700.1 37360 g118956 i0 44.4 2.13445378151261 90 42 68.9 2 107 352 132 221 CEO99700.1 hypothetical protein PBRA_007433 [Plasmodiophora brassicae] diamond 762 77.8 0.994858611825193 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
30379775 30379775 PRJNA906294_P_NODE_107932_length_392_cov_2.771160_g103817_i0 PRJNA906294 107932 392 2.77116 10.8629472 Endomyxa 2604748 SAR_Eukaryotes SAR_Eukaryotes 139 6.51e-38   NR CEP00766.1 37360 g103817 i0 71.1 2.24234693877551 97 28 74.2 0 291 1 2 98 CEP00766.1 hypothetical protein PBRA_008078 [Plasmodiophora brassicae] diamond 879 139 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
31390806 31390806 PRJNA906294_P_NODE_222056_length_244_cov_0.888889_g217940_i0 PRJNA906294 222056 244 0.888889 2.16888916 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 66.2 1.76e-10   NR MES1918299.1 126728 g217940 i0 44.6 5.92622950819672 74 38 91 2 228 7 206 276 MES1918299.1 ATP-binding cassette sub- F member 3 [Bonamia ostreae] diamond 1446 66.6 0.993993993993994 Eukaryota Sar   Endomyxa Ascetosporea Haplosporida   Bonamia Bonamia ostreae
31896703 31896703 PRJNA906294_P_NODE_210397_length_248_cov_0.874286_g206281_i0 PRJNA906294 210397 248 0.874286 2.16822928 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 109 2.56e-27   NR CEP02495.1 37360 g206281 i0 66.7 3.95564516129032 81 27 98 0 244 2 54 134 CEP02495.1 hypothetical protein PBRA_009079 [Plasmodiophora brassicae] diamond 981 110 0.990909090909091 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;