contig_metadata
10 rows where bioproject = "PRJNA906294", tax_kingdom = "Pseudomonadati" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 888143 | 888143 | PRJNA906294_P_NODE_223741_length_243_cov_1.600000_g219625_i0 | PRJNA906294 | 223741 | 243 | 1.6 | 3.888 | Thermosulfurimonas marina | 2047767 | Bacteria | Bacteria | 183 | 7.44e-42 | NTclustered | gi|1831559056|gb|CP042909.1| | 2047767 | g219625 | i0 | 80.591 | 15.0946502057613 | 237 | 46 | 98 | 0 | 3 | 239 | 484038 | 483802 | Thermosulfurimonas marina strain SU872 chromosome, complete genome | blastn | 3668 | 183 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteria | Thermodesulfobacteriales | Thermodesulfobacteriaceae | Thermosulfurimonas | Thermosulfurimonas marina | ||
| 3438870 | 3438870 | PRJNA906294_P_NODE_22283_length_1227_cov_7.052860_g19515_i0 | PRJNA906294 | 22283 | 1227 | 7.05286 | 86.5385922 | Geoalkalibacter subterraneus | 483547 | Bacteria | Bacteria | 215 | 1.51e-50 | NTclustered | gi|749207097|gb|CP010311.1| | 483547 | g19515 | i0 | 85.167 | 5.08068459657702 | 209 | 31 | 17 | 0 | 219 | 427 | 22924 | 23132 | Geoalkalibacter subterraneus strain Red1, complete genome | blastn | 6234 | 215 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Geoalkalibacteraceae | Geoalkalibacter | Geoalkalibacter subterraneus | ||
| 22566579 | 22566579 | PRJNA906294_P_NODE_73638_length_525_cov_2.287611_g69533_i0 | PRJNA906294 | 73638 | 525 | 2.287611 | 12.00995775 | uncultured Desulfobacter sp. | 240139 | Bacteria | Bacteria | 54.7 | 0.014 | NTclustered | gi|2814788332|emb|OY762228.2| | 240139 | g69533 | i0 | 100 | 0.0552380952380952 | 29 | 0 | 6 | 0 | 280 | 308 | 604126 | 604154 | MAG: uncultured Desulfobacter sp. isolate cd87f30c-30a5-471b-81aa-180dc00a34f5 genome assembly, chromosome: 1 | blastn | 29 | 54.7 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteraceae | Desulfobacter | uncultured Desulfobacter sp. | ||
| 26802685 | 26802685 | PRJNA906294_P_NODE_191221_length_264_cov_1.340314_g187105_i0 | PRJNA906294 | 191221 | 264 | 1.340314 | 3.53842896 | Desulfobulbaceae bacterium | 2053307 | Bacteria | Bacteria | 43.1 | 0.035 | NR | HHL34124.1 | 2053307 | g187105 | i0 | 35.7 | 0.636363636363636 | 56 | 36 | 63.6 | 0 | 18 | 185 | 545 | 600 | HHL34124.1 response regulator [Desulfobulbaceae bacterium] | diamond | 168 | 43.1 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Desulfobulbaceae bacterium | |||
| 26866358 | 26866358 | PRJNA906294_P_NODE_163841_length_293_cov_2.236364_g159725_i0 | PRJNA906294 | 163841 | 293 | 2.236364 | 6.55254652 | Desulfobacterales bacterium | 2044940 | Bacteria | Bacteria | 78.2 | 7.37e-16 | NR | MDX1707214.1 | 2044940 | g159725 | i0 | 50 | 4.3617747440273 | 82 | 39 | 84 | 2 | 249 | 4 | 42 | 121 | MDX1707214.1 Hsp20/alpha crystallin family protein [Desulfobacterales bacterium] | diamond | 1278 | 78.2 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacterales bacterium | ||||
| 28161541 | 28161541 | PRJNA906294_P_NODE_121805_length_359_cov_4.230769_g117689_i0 | PRJNA906294 | 121805 | 359 | 4.230769 | 15.18846071 | Smithellaceae bacterium | 2964540 | Bacteria | Bacteria | 58.2 | 4.83e-7 | NR | HPD56940.1 | 2964540 | g117689 | i0 | 41 | 1.38718662952646 | 83 | 36 | 69.4 | 3 | 250 | 2 | 239 | 308 | HPD56940.1 RHS repeat-associated core domain-containing protein [Smithellaceae bacterium] | diamond | 498 | 58.2 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophia | Syntrophales | Smithellaceae | Smithellaceae bacterium | |||
| 28168906 | 28168906 | PRJNA906294_P_NODE_51805_length_686_cov_2.381729_g47811_i0 | PRJNA906294 | 51805 | 686 | 2.381729 | 16.33866094 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 205 | 5.4e-63 | NR | HEY9161896.1 | 3041274 | g47811 | i0 | 60.5 | 5.37026239067055 | 172 | 68 | 75.2 | 0 | 666 | 151 | 30 | 201 | HEY9161896.1 NAD(P)H:quinone oxidoreductase [Desulfomonilia bacterium] | diamond | 3684 | 207 | 0.990338164251208 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfomonilia | Desulfomonilia bacterium | |||||
| 28508767 | 28508767 | PRJNA906294_P_NODE_50867_length_695_cov_4.654341_g46888_i0 | PRJNA906294 | 50867 | 695 | 4.654341 | 32.34766995 | Desulfobacterales bacterium | 2044940 | Bacteria | Bacteria | 149 | 2.49e-40 | NR | MCP4692921.1 | 2044940 | g46888 | i0 | 39.5 | 4.5021582733813 | 223 | 125 | 93.2 | 4 | 674 | 27 | 30 | 249 | MCP4692921.1 DUF4197 domain-containing protein [Desulfobacterales bacterium] | diamond | 3129 | 149 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacterales bacterium | ||||
| 31762624 | 31762624 | PRJNA906294_P_NODE_120457_length_362_cov_1.937716_g116342_i0 | PRJNA906294 | 120457 | 362 | 1.937716 | 7.01453192 | Thermodesulfobacteriota bacterium | 2202153 | Bacteria | Bacteria | 43.9 | 0.0483 | NR | HMK65614.1 | 2202153 | g116342 | i0 | 35.4 | 0.538674033149171 | 65 | 42 | 53.9 | 0 | 35 | 229 | 46 | 110 | HMK65614.1 CoA-transferase [Thermodesulfobacteriota bacterium] | diamond | 195 | 43.9 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 32371530 | 32371530 | PRJNA906294_P_NODE_210779_length_248_cov_0.868571_g206663_i0 | PRJNA906294 | 210779 | 248 | 0.868571 | 2.15405608 | Desulfobacteria | 3024418 | Bacteria | Bacteria | 119 | 3e-29 | NR | MDH3567976.1 | 2049433 | g206663 | i0 | 68.9 | 17.1895161290323 | 74 | 23 | 89.5 | 0 | 227 | 6 | 381 | 454 | MDH3567976.1 acyl-CoA synthetase [Desulfobacteraceae bacterium] | diamond | 4263 | 120 | 0.991666666666667 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteraceae | Desulfobacteraceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;