metadata: contig_metadata: 14 rows where bioproject = "PRJNA906294", tax_kingdom = "Pseudomonadati" and tax

14 rows where bioproject = "PRJNA906294", tax_kingdom = "Pseudomonadati" and tax_phylum = "Campylobacterota"

descending

Link	rowid ▼	query	bioproject	node	length	coverage	rel_abundance	taxname_lca	taxid_lca	taxoncategory	taxoncategorysimple	bits	evalue	analysis_used	target	taxid	gene	allele	pident	sumperc_cov	alnlen	mismatch	qcov	gapopen	qstart	qend	tstart	tend	target_title	analysis	sumalnlen	maxbits	bits_percmax	tax_superkingdom	tax_kingdom	tax_phylum	tax_class	tax_order	tax_family	tax_genus	tax_species
7626783	7626783	PRJNA906294_P_NODE_233646_length_231_cov_2.417722_g229530_i0	PRJNA906294	233646	231	2.417722	5.58493782	Aliarcobacter	2321111	Bacteria	Bacteria	425	1.0599999999999999e-114	NTclustered	gi\|1817415496\|gb\|CP026656.1\|	28198	g229530	i0	100	391.424242424242	230	0	99	0	2	231	57029	56800	Aliarcobacter cryaerophilus strain M830MA chromosome, complete genome	blastn	90419	425	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Arcobacteraceae	Aliarcobacter	Aliarcobacter cryaerophilus
11090392	11090392	PRJNA906294_P_NODE_162329_length_295_cov_1.725225_g158213_i0	PRJNA906294	162329	295	1.725225	5.08941375	uncultured Arcobacter sp.	165434	Bacteria	Bacteria	342	1.45e-89	NTclustered	gi\|682122801\|gb\|KJ739652.1\|	165434	g158213	i0	89.888	135.416949152542	267	25	90	2	30	295	6	271	Uncultured Arcobacter sp. clone ONWR3-May-27-2012 23S ribosomal RNA gene, partial sequence	blastn	39948	342	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Arcobacteraceae	Arcobacter	uncultured Arcobacter sp.
12728033	12728033	PRJNA906294_P_NODE_202290_length_253_cov_1.350000_g198174_i0	PRJNA906294	202290	253	1.35	3.4155	Bacteria	2	Bacteria	Bacteria	446	9.01e-121	NTclustered	gi\|2290299522\|gb\|CP103055.1\|	195	g198174	i0	98.419	102	253	4	100	0	1	253	741790	742042	Campylobacter coli strain YC3-24 chromosome, complete genome	blastn	25806	446	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter coli
13643266	13643266	PRJNA906294_P_NODE_79591_length_495_cov_0.900474_g75480_i0	PRJNA906294	79591	495	0.900474	4.4573463	Helicobacter pylori	210	Bacteria	Bacteria	52.8	0.048	NTclustered	gi\|2641893407\|gb\|CP078355.1\|	210	g75480	i0	100	0.0565656565656566	28	0	6	0	112	139	275436	275463	Helicobacter pylori strain HpGP-SPA-105 chromosome, complete genome	blastn	28	52.8	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter pylori
27782591	27782591	PRJNA906294_P_NODE_140164_length_326_cov_1.774704_g136048_i0	PRJNA906294	140164	326	1.774704	5.78553504	Helicobacter trogontum	50960	Bacteria	Bacteria	48.1	0.00109	NR	WP_104742158.1	50960	g136048	i0	33.7	1.25153374233129	83	46	76.4	2	36	284	16	89	WP_104742158.1 phosphotransferase [Helicobacter trogontum]	diamond	408	48.1	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter trogontum
27971892	27971892	PRJNA906294_P_NODE_187345_length_268_cov_1.169231_g183229_i0	PRJNA906294	187345	268	1.169231	3.13353908	Helicobacter pylori	210	Bacteria	Bacteria	43.1	0.00293	NR	GAA9108707.1	210	g183229	i0	66.7	0.302238805970149	27	9	30.2	0	176	256	9	35	GAA9108707.1 hypothetical protein Kyoto184A_09740 [Helicobacter pylori]	diamond	81	43.1	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter pylori
28129932	28129932	PRJNA906294_P_NODE_38865_length_848_cov_3.869677_g35187_i0	PRJNA906294	38865	848	3.869677	32.81486096	Helicobacter pylori	210	Bacteria	Bacteria	46.6	0.00481	NR	GAA6863873.1	210	g35187	i0	44.4	0.159198113207547	45	24	15.6	1	794	663	25	69	GAA6863873.1 hypothetical protein Kyoto206A_2050 [Helicobacter pylori]	diamond	135	46.6	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter pylori
28224354	28224354	PRJNA906294_P_NODE_89646_length_451_cov_2.365079_g85532_i0	PRJNA906294	89646	451	2.365079	10.66650629	Helicobacter pylori	210	Bacteria	Bacteria	54.3	6.94e-7	NR	GAA8856488.1	210	g85532	i0	54.2	0.638580931263858	48	22	31.9	0	246	103	1	48	GAA8856488.1 hypothetical protein Kyoto154A_2050 [Helicobacter pylori]	diamond	288	54.3	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter pylori
29803175	29803175	PRJNA906294_P_NODE_54511_length_661_cov_1.549320_g50481_i0	PRJNA906294	54511	661	1.54932	10.2410052	Campylobacterota bacterium	2026809	Bacteria	Bacteria	49.3	0.00682	NR	MEA3354675.1	2026809	g50481	i0	43.1	0.29500756429652	65	36	29.5	1	487	293	683	746	MEA3354675.1 adenylate/guanylate cyclase domain-containing protein [Campylobacterota bacterium]	diamond	195	49.3	1	Bacteria	Pseudomonadati	Campylobacterota					Campylobacterota bacterium
30466966	30466966	PRJNA906294_P_NODE_106613_length_396_cov_1.609907_g102498_i0	PRJNA906294	106613	396	1.609907	6.37523172	Arcobacter cloacae	1054034	Bacteria	Bacteria	45.4	0.0192	NR	WP_172658256.1	1054034	g102498	i0	43.9	0.431818181818182	57	31	42.4	1	80	247	108	164	WP_172658256.1 AAA family ATPase [Arcobacter cloacae]	diamond	171	45.4	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Arcobacteraceae	Arcobacter	Arcobacter cloacae
30719403	30719403	PRJNA906294_P_NODE_232614_length_237_cov_2.676829_g228498_i0	PRJNA906294	232614	237	2.676829	6.34408473	Helicobacter pylori	210	Bacteria	Bacteria	50.4	3.6e-6	NR	GAA6899098.1	210	g228498	i0	80	0.569620253164557	25	5	31.6	0	235	161	7	31	GAA6899098.1 hypothetical protein Kyoto207A_0760 [Helicobacter pylori]	diamond	135	50.4	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter pylori
30782605	30782605	PRJNA906294_P_NODE_183454_length_272_cov_1.145729_g179338_i0	PRJNA906294	183454	272	1.145729	3.11638288	Helicobacter pylori	210	Bacteria	Bacteria	51.6	6.23e-6	NR	GAA9125653.1	210	g179338	i0	35.5	0.838235294117647	76	41	75	1	249	46	4	79	GAA9125653.1 hypothetical protein Kyoto190A_0940 [Helicobacter pylori]	diamond	228	51.6	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter pylori
32371532	32371532	PRJNA906294_P_NODE_219159_length_245_cov_0.883721_g215043_i0	PRJNA906294	219159	245	0.883721	2.16511645	root	1	Root_unresolved	Root_unresolved	47.8	4.5e-5	NR	GAA9020730.1	210	g215043	i0	57.1	1.15102040816327	42	18	51.4	0	8	133	6	47	GAA9020730.1 hypothetical protein Kyoto181A_7750 [Helicobacter pylori]	diamond	282	47.8	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter pylori
32522323	32522323	PRJNA906294_P_NODE_167099_length_290_cov_0.866359_g162983_i0	PRJNA906294	167099	290	0.866359	2.5124411	Halarcobacter bivalviorum	663364	Bacteria	Bacteria	41.6	0.0317	NR	WP_114839858.1	663364	g162983	i0	36	0.517241379310345	50	32	51.7	0	115	264	24	73	WP_114839858.1 hypothetical protein [Halarcobacter bivalviorum]	diamond	150	41.6	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Arcobacteraceae	Halarcobacter	Halarcobacter bivalviorum

Advanced export

JSON shape: default, array, newline-delimited

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;