RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA906294", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 5 ✖

tax_kingdom 1

  • Fungi · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA906294 · 5 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12728101 12728101 PRJNA906294_P_NODE_216910_length_246_cov_0.878613_g212794_i0 PRJNA906294 216910 246 0.878613 2.16138798 Fungi 4751 Fungi Fungi 148 3.32e-39   NR EPZ35768.1 988480 g212794 i0 88.9 15.8048780487805 81 9 98.8 0 244 2 256 336 EPZ35768.1 ATPase, AAA-type domain-containing protein [Rozella allomycis CSF55] diamond 3888 149 0.993288590604027 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
26738957 26738957 PRJNA906294_P_NODE_126501_length_350_cov_1.465704_g122385_i0 PRJNA906294 126501 350 1.465704 5.129964 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 50.4 2.18e-4   NR PJF16520.1 1246581 g122385 i0 37.7 0.522857142857143 61 36 50.6 1 214 38 1 61 PJF16520.1 hypothetical protein PSACC_03714 [Paramicrosporidium saccamoebae] diamond 183 50.4 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
30909171 30909171 PRJNA906294_P_NODE_234494_length_224_cov_20.701987_g230378_i0 PRJNA906294 234494 224 20.701987 46.37245088 Rozella allomycis CSF55 988480 Fungi Fungi 80.9 2.19e-16   NR EPZ34692.1 988480 g230378 i0 66.2 4.20535714285714 65 21 85.7 1 12 203 190 254 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 942 80.9 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
31011265 31011265 PRJNA906294_P_NODE_124654_length_354_cov_1.081851_g120538_i0 PRJNA906294 124654 354 1.081851 3.82975254 Opisthokonta 33154 Fungi Fungi 145 1.25e-39   NR RKP19700.1 988480 g120538 i0 58.4 16.7203389830508 113 45 95.8 1 354 16 180 290 RKP19700.1 flap endonuclease 1 [Rozella allomycis CSF55] diamond 5919 146 0.993150684931507 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
31327343 31327343 PRJNA906294_P_NODE_170155_length_286_cov_1.427230_g166039_i0 PRJNA906294 170155 286 1.42723 4.0818778 Eukaryota 2759 Fungi Fungi 120 1.27e-29   NR RKP19658.1 988480 g166039 i0 66.7 6.62937062937063 78 26 81.8 0 236 3 4 81 RKP19658.1 centromere/microtubule-binding protein cbf5 [Rozella allomycis CSF55] diamond 1896 120 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;