RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA906294", tax_clade = "Stenosarchaea group" and tax_phylum = "Methanobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 2 ✖

bioproject 1

  • PRJNA906294 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28003722 28003722 PRJNA906294_P_NODE_185165_length_270_cov_1.401015_g181049_i0 PRJNA906294 185165 270 1.401015 3.7827405 Methanoregula sp. 2052170 Archaea Archaea 46.2 0.00286   NR MFA6332232.1 2052170 g181049 i0 33 1.95555555555556 88 54 97.8 2 2 265 238 320 MFA6332232.1 thioredoxin domain-containing protein [Methanoregula sp.] diamond 528 46.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
28603506 28603506 PRJNA906294_P_NODE_187187_length_268_cov_1.379487_g183071_i0 PRJNA906294 187187 268 1.379487 3.69702516 Halobacteriales archaeon QS_4_7 1904752 Archaea Archaea 43.9 0.0195   NR PSP97764.1 1919178 g183071 i0 28.6 0.861940298507463 77 53 86.2 1 2 232 343 417 PSP97764.1 MAG: phosphoglucosamine mutase [Halobacteriales archaeon QS_4_70_19] diamond 231 43.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     Halobacteriales archaeon QS_4_70_19

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;