RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA906294", tax_clade = "Nitrospinota/Tectimicrobiota group" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 2 ✖

bioproject 1

  • PRJNA906294 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27971871 27971871 PRJNA906294_P_NODE_147385_length_315_cov_1.995868_g143269_i0 PRJNA906294 147385 315 1.995868 6.2869842 Nitrospinota bacterium 2026769 Bacteria Bacteria 57.8 4.6e-7   NR MDH5638355.1 2026769 g143269 i0 37.5 1.83809523809524 96 59 91.4 1 1 288 22 116 MDH5638355.1 hypothetical protein [Nitrospinota bacterium] diamond 579 57.8 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium
29992882 29992882 PRJNA906294_P_NODE_94171_length_435_cov_1.259669_g90057_i0 PRJNA906294 94171 435 1.259669 5.47956015 Nitrospinota bacterium 2026769 Bacteria Bacteria 44.7 0.0418   NR MBI3815259.1 2026769 g90057 i0 27.1 0.889655172413793 129 84 84.8 5 30 398 87 211 MBI3815259.1 helix-hairpin-helix domain-containing protein [Nitrospinota bacterium] diamond 387 44.7 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;