contig_metadata
15 rows where bioproject = "PRJNA906294", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5989840 | 5989840 | PRJNA906294_P_NODE_151985_length_309_cov_1.122881_g147869_i0 | PRJNA906294 | 151985 | 309 | 1.122881 | 3.46970229 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 235 | 2.67e-57 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g147869 | i0 | 83.396 | 362.68284789644 | 265 | 32 | 83 | 10 | 1 | 258 | 171814 | 171555 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 112069 | 235 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 27309000 | 27309000 | PRJNA906294_P_NODE_170363_length_286_cov_1.187793_g166247_i0 | PRJNA906294 | 170363 | 286 | 1.187793 | 3.39708798 | Longimicrobium sp. | 2029185 | Bacteria | Bacteria | 43.9 | 0.0234 | NR | WP_331074889.1 | 2029185 | g166247 | i0 | 38.6 | 0.734265734265734 | 70 | 40 | 73.4 | 1 | 13 | 222 | 60 | 126 | WP_331074889.1 PQQ-binding-like beta-propeller repeat protein [Longimicrobium sp.] | diamond | 210 | 43.9 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium sp. | |
| 28666699 | 28666699 | PRJNA906294_P_NODE_232787_length_236_cov_2.687117_g228671_i0 | PRJNA906294 | 232787 | 236 | 2.687117 | 6.34159612 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 42.4 | 0.0451 | NR | MEO5815131.1 | 2026741 | g228671 | i0 | 39.1 | 0.584745762711864 | 46 | 28 | 58.5 | 0 | 59 | 196 | 241 | 286 | MEO5815131.1 FAD-binding protein [Gemmatimonadaceae bacterium] | diamond | 138 | 42.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 29455520 | 29455520 | PRJNA906294_P_NODE_127830_length_348_cov_0.941818_g123714_i0 | PRJNA906294 | 127830 | 348 | 0.941818 | 3.27752664 | Gemmatimonas sp. UBA7669 | 1946568 | Bacteria | Bacteria | 46.2 | 0.0074 | NR | WP_291157223.1 | 1946568 | g123714 | i0 | 33.8 | 1.49137931034483 | 65 | 43 | 56 | 0 | 128 | 322 | 652 | 716 | WP_291157223.1 serine/threonine-protein kinase [Gemmatimonas sp. UBA7669] | diamond | 519 | 46.2 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas sp. UBA7669 | |
| 29487313 | 29487313 | PRJNA906294_P_NODE_216110_length_246_cov_0.878613_g211994_i0 | PRJNA906294 | 216110 | 246 | 0.878613 | 2.16138798 | Longimicrobiaceae bacterium | 3047548 | Bacteria | Bacteria | 45.8 | 0.00115 | NR | HEX2188859.1 | 3047548 | g211994 | i0 | 35.6 | 0.719512195121951 | 59 | 38 | 72 | 0 | 64 | 240 | 36 | 94 | HEX2188859.1 hypothetical protein [Longimicrobiaceae bacterium] | diamond | 177 | 45.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobiaceae bacterium | ||
| 29518987 | 29518987 | PRJNA906294_P_NODE_105990_length_398_cov_1.261538_g101875_i0 | PRJNA906294 | 105990 | 398 | 1.261538 | 5.02092124 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 83.6 | 1.05e-15 | NR | HVX39141.1 | 2026741 | g101875 | i0 | 40 | 1.84673366834171 | 125 | 66 | 93.5 | 3 | 12 | 383 | 6 | 122 | HVX39141.1 cholesterol oxidase substrate-binding domain-containing protein [Gemmatimonadaceae bacterium] | diamond | 735 | 83.6 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 29866466 | 29866466 | PRJNA906294_P_NODE_87051_length_462_cov_1.064267_g82937_i0 | PRJNA906294 | 87051 | 462 | 1.064267 | 4.91691354 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 46.2 | 0.0201 | NR | MEA3247283.1 | 2026742 | g82937 | i0 | 33.6 | 0.792207792207792 | 122 | 68 | 73.4 | 4 | 54 | 392 | 442 | 559 | MEA3247283.1 selenocysteine-specific translation elongation factor [Gemmatimonadota bacterium] | diamond | 366 | 46.2 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 30182287 | 30182287 | PRJNA906294_P_NODE_226752_length_242_cov_1.390533_g222636_i0 | PRJNA906294 | 226752 | 242 | 1.390533 | 3.36508986 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 47.8 | 6.35e-4 | NR | MBT4979715.1 | 2026742 | g222636 | i0 | 34.7 | 0.892561983471074 | 72 | 45 | 88 | 2 | 242 | 30 | 646 | 716 | MBT4979715.1 PQQ-binding-like beta-propeller repeat protein [Gemmatimonadota bacterium] | diamond | 216 | 47.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 30435356 | 30435356 | PRJNA906294_P_NODE_179833_length_275_cov_2.514851_g175717_i0 | PRJNA906294 | 179833 | 275 | 2.514851 | 6.91584025 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 98.2 | 1.3400000000000002e-21 | NR | MEP7326825.1 | 2026742 | g175717 | i0 | 57.1 | 0.992727272727273 | 91 | 39 | 99.3 | 0 | 3 | 275 | 67 | 157 | MEP7326825.1 hypothetical protein [Gemmatimonadota bacterium] | diamond | 273 | 98.2 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 31256580 | 31256580 | PRJNA906294_P_NODE_180395_length_275_cov_1.217822_g176279_i0 | PRJNA906294 | 180395 | 275 | 1.217822 | 3.3490105 | Longimicrobiales bacterium | 2910168 | Bacteria | Bacteria | 43.1 | 0.0246 | NR | MFV2006094.1 | 2910168 | g176279 | i0 | 34.3 | 0.763636363636364 | 70 | 46 | 76.4 | 0 | 41 | 250 | 10 | 79 | MFV2006094.1 magnesium transporter MgtE N-terminal domain-containing protein [Longimicrobiales bacterium] | diamond | 210 | 43.1 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiales bacterium | |||
| 31485785 | 31485785 | PRJNA906294_P_NODE_224836_length_243_cov_0.894118_g220720_i0 | PRJNA906294 | 224836 | 243 | 0.894118 | 2.17270674 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 83.6 | 1.34e-18 | NR | MDQ3672764.1 | 2026742 | g220720 | i0 | 51.4 | 3.7037037037037 | 74 | 36 | 91.4 | 0 | 1 | 222 | 18 | 91 | MDQ3672764.1 HAD hydrolase-like protein [Gemmatimonadota bacterium] | diamond | 900 | 83.6 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 31636156 | 31636156 | PRJNA906294_P_NODE_92556_length_441_cov_1.027174_g88442_i0 | PRJNA906294 | 92556 | 441 | 1.027174 | 4.52983734 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 45.4 | 0.0345 | NR | HEX6943759.1 | 2026741 | g88442 | i0 | 40.2 | 0.625850340136054 | 92 | 48 | 61.2 | 4 | 156 | 425 | 1771 | 1857 | HEX6943759.1 Ig-like domain-containing protein [Gemmatimonadaceae bacterium] | diamond | 276 | 45.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 31675207 | 31675207 | PRJNA906294_P_NODE_204177_length_251_cov_1.707865_g200061_i0 | PRJNA906294 | 204177 | 251 | 1.707865 | 4.28674115 | FCB group | 1783270 | Bacteria | Bacteria | 59.7 | 1.01e-8 | NR | HRN52631.1 | 2026741 | g200061 | i0 | 46.3 | 4.99601593625498 | 82 | 41 | 98 | 2 | 3 | 248 | 18 | 96 | HRN52631.1 GNAT family N-acetyltransferase [Gemmatimonadaceae bacterium] | diamond | 1254 | 60.1 | 0.993344425956739 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 31699514 | 31699514 | PRJNA906294_P_NODE_215737_length_246_cov_1.127168_g211621_i0 | PRJNA906294 | 215737 | 246 | 1.127168 | 2.77283328 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 43.1 | 0.0289 | NR | PYP38643.1 | 2026742 | g211621 | i0 | 32.3 | 0.75609756097561 | 62 | 40 | 73.2 | 1 | 246 | 67 | 65 | 126 | PYP38643.1 MAG: hypothetical protein DMD48_08985 [Gemmatimonadota bacterium] | diamond | 186 | 43.1 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 31952423 | 31952423 | PRJNA906294_P_NODE_177957_length_277_cov_2.519608_g173841_i0 | PRJNA906294 | 177957 | 277 | 2.519608 | 6.97931416 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 48.1 | 6.73e-4 | NR | HSR16316.1 | 2448054 | g173841 | i0 | 65.6 | 1.07220216606498 | 32 | 11 | 34.7 | 0 | 102 | 7 | 2 | 33 | HSR16316.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN [Gemmatimonadales bacterium] | diamond | 297 | 48.1 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;