RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA906294", tax_clade = "FCB group" and tax_phylum = "Fibrobacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fibrobacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA906294 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29014178 29014178 PRJNA906294_P_NODE_156268_length_303_cov_1.321739_g152152_i0 PRJNA906294 156268 303 1.321739 4.00486917 Chitinispirillia bacterium 2604142 Bacteria Bacteria 44.3 0.0211   NR MCL2219450.1 2604142 g152152 i0 38 0.702970297029703 71 37 70.3 3 252 40 6 69 MCL2219450.1 glycoside hydrolase family 57 [Chitinispirillia bacterium] diamond 213 44.3 1 Bacteria FCB group Pseudomonadati Fibrobacterota Chitinispirillia       Chitinispirillia bacterium
31414780 31414780 PRJNA906294_P_NODE_183216_length_272_cov_1.432161_g179100_i0 PRJNA906294 183216 272 1.432161 3.89547792 Fibrobacter sp. 35828 Bacteria Bacteria 42.7 0.0492   NR WP_290951815.1 35828 g179100 i0 33.3 0.761029411764706 69 36 67.3 3 78 260 119 185 WP_290951815.1 hypothetical protein [Fibrobacter sp.] diamond 207 42.7 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae Fibrobacter Fibrobacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;