RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA906294", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA906294 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27056058 27056058 PRJNA906294_P_NODE_222542_length_244_cov_0.888889_g218426_i0 PRJNA906294 222542 244 0.888889 2.16888916 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 72.4 9.04e-14   NR MFP6583391.1 2030809 g218426 i0 53.3 3.78688524590164 75 31 91 2 231 10 84 155 MFP6583391.1 cyclic pyranopterin monophosphate synthase MoaC [Candidatus Hydrogenedentota bacterium] diamond 924 72.4 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
28105630 28105630 PRJNA906294_P_NODE_210705_length_248_cov_0.868571_g206589_i0 PRJNA906294 210705 248 0.868571 2.15405608 FCB group 1783270 Bacteria Bacteria 57.4 1.85e-7   NR HPO16429.1 2030809 g206589 i0 50.8 3.62903225806452 63 29 76.2 1 189 1 52 112 HPO16429.1 3-hydroxyacyl-CoA dehydrogenase [Candidatus Hydrogenedentota bacterium] diamond 900 57.4 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;