RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

17 rows where bioproject = "PRJNA906294", tax_clade = "Bacteria candidate phyla" and tax_superkingdom = "Bacteria"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

  • Bacteria · 17 ✖

tax_clade 1

  • Bacteria candidate phyla · 17 ✖

bioproject 1

  • PRJNA906294 · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25475149 25475149 PRJNA906294_P_NODE_198020_length_257_cov_1.554348_g193904_i0 PRJNA906294 198020 257 1.554348 3.99467436 Candidatus Nanosynbacteraceae 2093822 Bacteria Bacteria 464 2.5299999999999998e-126   NTclustered gi|1842054184|gb|CP039999.1| 713059 g193904 i0 99.222 72.704280155642 257 2 100 0 1 257 143863 143607 Candidatus Saccharibacteria bacterium oral taxon 488 strain CM001 chromosome, complete genome blastn 18685 464 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 488
26612593 26612593 PRJNA906294_P_NODE_125701_length_352_cov_1.017921_g121585_i0 PRJNA906294 125701 352 1.017921 3.58308192 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 47.4 0.00297   NR PWU25070.1 2053607 g121585 i0 31.8 0.5625 66 41 56.3 1 241 44 131 192 PWU25070.1 MAG: hypothetical protein C5B48_03195, partial [Candidatus Rokuibacteriota bacterium] diamond 198 47.4 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
26675849 26675849 PRJNA906294_P_NODE_234721_length_208_cov_5.977778_g230605_i0 PRJNA906294 234721 208 5.977778 12.43377824 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 41.2 0.0488   NR MCJ7588736.1 2052149 g230605 i0 59.5 0.533653846153846 37 12 53.4 1 180 70 4 37 MCJ7588736.1 tetratricopeptide repeat protein [Candidatus Aminicenantes bacterium] diamond 111 41.2 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
27309009 27309009 PRJNA906294_P_NODE_189363_length_266_cov_1.181347_g185247_i0 PRJNA906294 189363 266 1.181347 3.14238302 Candidatus Dependentiae bacterium 2030827 Bacteria Bacteria 43.1 0.00616   NR RTL06915.1 2030827 g185247 i0 63 0.304511278195489 27 10 30.5 0 82 2 36 62 RTL06915.1 MAG: hypothetical protein EKK58_03725 [Candidatus Dependentiae bacterium] diamond 81 43.1 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium
27561231 27561231 PRJNA906294_P_NODE_135404_length_334_cov_1.452107_g131288_i0 PRJNA906294 135404 334 1.452107 4.85003738 Candidatus Babeliales bacterium 2803731 Bacteria Bacteria 55.8 2.3e-6   NR HLB93969.1 2803731 g131288 i0 41.3 0.565868263473054 63 35 54.8 1 115 297 131 193 HLB93969.1 hypothetical protein [Candidatus Babeliales bacterium] diamond 189 55.8 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales     Candidatus Babeliales bacterium
27656396 27656396 PRJNA906294_P_NODE_82404_length_482_cov_0.929095_g78290_i0 PRJNA906294 82404 482 0.929095 4.4782379 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 46.2 0.0236   NR HXG20725.1 2072417 g78290 i0 51.1 0.280082987551867 45 22 28 0 25 159 566 610 HXG20725.1 recombinase family protein [Candidatus Methylomirabilota bacterium] diamond 135 46.2 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
29014201 29014201 PRJNA906294_P_NODE_196368_length_259_cov_1.225806_g192252_i0 PRJNA906294 196368 259 1.225806 3.17483754 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 40.8 0.043   NR MCX6752098.1 2052152 g192252 i0 37.3 0.590733590733591 51 32 59.1 0 58 210 32 82 MCX6752098.1 YdeI/OmpD-associated family protein [Candidatus Nomurabacteria bacterium] diamond 153 40.8 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
29266291 29266291 PRJNA906294_P_NODE_230489_length_241_cov_0.904762_g226373_i0 PRJNA906294 230489 241 0.904762 2.18047642 SCandidatus Aminicenantes bacterium Aminicenantia_JdfR_composite 2950077 Bacteria Bacteria 42 0.0426   NR MCP2521087.1 2950077 g226373 i0 36.4 0.821576763485477 66 40 79.7 1 212 21 84 149 MCP2521087.1 hypothetical protein [SCandidatus Aminicenantes bacterium Aminicenantia_JdfR_composite] diamond 198 42 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         SCandidatus Aminicenantes bacterium Aminicenantia_JdfR_composite
29581869 29581869 PRJNA906294_P_NODE_185090_length_270_cov_1.512690_g180974_i0 PRJNA906294 185090 270 1.51269 4.084263 Minisyncoccota bacterium 2053589 Bacteria Bacteria 60.1 2.85e-9   NR MDR3570671.1 2053589 g180974 i0 48.8 0.888888888888889 80 34 81.1 2 2 220 29 108 MDR3570671.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 240 60.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29708116 29708116 PRJNA906294_P_NODE_219770_length_245_cov_0.883721_g215654_i0 PRJNA906294 219770 245 0.883721 2.16511645 Candidatus Acetothermia bacterium 2053493 Bacteria Bacteria 70.9 4.64e-12   NR MBI1730412.1 2053493 g215654 i0 51.4 0.857142857142857 70 27 85.7 2 35 244 305 367 MBI1730412.1 choline dehydrogenase [Candidatus Acetothermia bacterium] diamond 210 70.9 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Acetothermia bacterium
29834748 29834748 PRJNA906294_P_NODE_122131_length_359_cov_1.230769_g118015_i0 PRJNA906294 122131 359 1.230769 4.41846071 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 43.9 0.0435   NR HEV8473074.1 2072417 g118015 i0 44 0.417827298050139 50 22 40.1 2 47 190 202 247 HEV8473074.1 alpha/beta fold hydrolase [Candidatus Methylomirabilota bacterium] diamond 150 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
30150511 30150511 PRJNA906294_P_NODE_210932_length_248_cov_0.868571_g206816_i0 PRJNA906294 210932 248 0.868571 2.15405608 Candidatus Wildermuthbacteria bacterium 2053642 Bacteria Bacteria 65.9 8.2e-12   NR MBI2644537.1 2053642 g206816 i0 53.2 3.18145161290323 62 29 75 0 199 14 4 65 MBI2644537.1 RNA-binding protein [Candidatus Wildermuthbacteria bacterium] diamond 789 65.9 1 Bacteria Bacteria candidate phyla   Candidatus Wildermuthiibacteriota         Candidatus Wildermuthbacteria bacterium
30245732 30245732 PRJNA906294_P_NODE_225132_length_243_cov_0.894118_g221016_i0 PRJNA906294 225132 243 0.894118 2.17270674 Candidatus Schekmanbacteria bacterium GWA2_38_9 1817877 Bacteria Bacteria 43.1 0.0271   NR OGL42178.1 1817877 g221016 i0 31 0.876543209876543 71 48 86.4 1 240 31 25 95 OGL42178.1 MAG: threonine synthase [Candidatus Schekmanbacteria bacterium GWA2_38_9] diamond 213 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Schekmaniibacteriota         Candidatus Schekmanbacteria bacterium GWA2_38_9
30372279 30372279 PRJNA906294_P_NODE_161632_length_296_cov_1.551570_g157516_i0 PRJNA906294 161632 296 1.55157 4.5926472 Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_ 2052154 Bacteria Bacteria 41.2 0.0274   NR OGN09284.1 1802674 g157516 i0 38.6 0.445945945945946 44 24 41.6 1 130 252 5 48 OGN09284.1 MAG: hypothetical protein A3C61_02855 [Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_02_FULL_39_10] diamond 132 41.2 1 Bacteria Bacteria candidate phyla   Candidatus Yanofskyibacteriota         Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_02_FULL_39_10
30751094 30751094 PRJNA906294_P_NODE_151974_length_309_cov_1.139831_g147858_i0 PRJNA906294 151974 309 1.139831 3.52207779 Candidatus Sumerlaeia bacterium 2715255 Bacteria Bacteria 44.7 0.0179   NR MDX2177298.1 2715255 g147858 i0 37.3 0.650485436893204 67 40 65 2 309 109 1247 1311 MDX2177298.1 C25 family cysteine peptidase [Candidatus Sumerlaeia bacterium] diamond 201 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia       Candidatus Sumerlaeia bacterium
32498154 32498154 PRJNA906294_P_NODE_155419_length_304_cov_1.350649_g151303_i0 PRJNA906294 155419 304 1.350649 4.10597296 Bacillati 1783272 Bacteria Bacteria 45.4 0.00908   NR MBT5711163.1 2026781 g151303 i0 33 5.84210526315789 97 60 93.8 3 298 14 494 587 MBT5711163.1 tandem-95 repeat protein [Candidatus Poribacteria bacterium] diamond 1776 45.8 0.991266375545852 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
32868580 32868580 PRJNA906294_P_NODE_222140_length_244_cov_0.888889_g218024_i0 PRJNA906294 222140 244 0.888889 2.16888916 Patescibacteria group bacterium 2052139 Bacteria Bacteria 53.1 3.99e-6   NR HEX8974144.1 2052139 g218024 i0 35.6 0.897540983606557 73 45 89.8 1 221 3 128 198 HEX8974144.1 CYTH domain-containing protein [Patescibacteria group bacterium] diamond 219 53.1 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;