RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA906294", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Sumerlaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sumerlaeota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA906294 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30751094 30751094 PRJNA906294_P_NODE_151974_length_309_cov_1.139831_g147858_i0 PRJNA906294 151974 309 1.139831 3.52207779 Candidatus Sumerlaeia bacterium 2715255 Bacteria Bacteria 44.7 0.0179   NR MDX2177298.1 2715255 g147858 i0 37.3 0.650485436893204 67 40 65 2 309 109 1247 1311 MDX2177298.1 C25 family cysteine peptidase [Candidatus Sumerlaeia bacterium] diamond 201 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia       Candidatus Sumerlaeia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;