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contig_metadata

15 rows where bioproject = "PRJNA906294" and tax_clade = "Apusozoa"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Apusozoa · 15 ✖

bioproject 1

  • PRJNA906294 · 15 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7263589 7263589 PRJNA906294_P_NODE_108626_length_390_cov_3.987382_g104511_i0 PRJNA906294 108626 390 3.987382 15.5507898 Thecamonas trahens 529818 Root_unresolved Root_unresolved 176 2.12e-39   NTclustered gi|923129792|ref|XM_013902908.1| 461836 g104511 i0 87.5 3.50512820512821 152 19 39 0 223 374 15 166 Thecamonas trahens ATCC 50062 Ras-like C3 botulinum toxin substrate 1 (AMSG_04690), mRNA blastn 1367 176 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
21287516 21287516 PRJNA906294_P_NODE_113837_length_377_cov_2.901316_g109722_i0 PRJNA906294 113837 377 2.901316 10.93796132 Catacumbia lutetiensis 2925415 Root_unresolved Root_unresolved 159 2.06e-34   NTclustered gi|2206682166|gb|OM966639.1| 2925415 g109722 i0 89.6 33.0848806366048 125 13 33 0 102 226 5178 5302 Catacumbia lutetiensis strain ORSAYFEB19APU2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12473 159 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Catacumbia Catacumbia lutetiensis
27150300 27150300 PRJNA906294_P_NODE_140502_length_326_cov_1.086957_g136386_i0 PRJNA906294 140502 326 1.086957 3.54347982 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 50.8 1.31e-4   NR XP_013752988.1 461836 g136386 i0 36 0.791411042944785 86 48 79.1 2 283 26 311 389 XP_013752988.1 N-acylethanolamine-hydrolyzing acid amidase [Thecamonas trahens ATCC 50062] diamond 258 50.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27277322 27277322 PRJNA906294_P_NODE_177223_length_278_cov_1.570732_g173107_i0 PRJNA906294 177223 278 1.570732 4.36663496 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 59.7 6.23e-8   NR XP_013761942.1 461836 g173107 i0 43.2 1.78057553956835 81 46 87.4 0 10 252 830 910 XP_013761942.1 MmpL efflux pump [Thecamonas trahens ATCC 50062] diamond 495 59.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28161544 28161544 PRJNA906294_P_NODE_129885_length_344_cov_1.121771_g125769_i0 PRJNA906294 129885 344 1.121771 3.85889224 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 119 4.2000000000000004e-30   NR XP_013763040.1 461836 g125769 i0 52.6 3.95058139534884 114 51 99.4 1 343 2 3 113 XP_013763040.1 Ras-like GTP-binding protein A [Thecamonas trahens ATCC 50062] diamond 1359 119 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28918948 28918948 PRJNA906294_P_NODE_121028_length_361_cov_1.496528_g116913_i0 PRJNA906294 121028 361 1.496528 5.40246608 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 100 8.34e-22   NR XP_013758417.1 461836 g116913 i0 39.5 0.988919667590028 119 67 94.7 1 343 2 45 163 XP_013758417.1 uncharacterized protein AMSG_04749 [Thecamonas trahens ATCC 50062] diamond 357 100 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29140359 29140359 PRJNA906294_P_NODE_102329_length_408_cov_2.143284_g98214_i0 PRJNA906294 102329 408 2.143284 8.74459872 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 53.5 3.61e-5   NR XP_013762149.1 461836 g98214 i0 46.4 0.411764705882353 56 27 41.2 1 151 318 85 137 XP_013762149.1 uncharacterized protein AMSG_00972 [Thecamonas trahens ATCC 50062] diamond 168 53.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29487327 29487327 PRJNA906294_P_NODE_86430_length_464_cov_1.976982_g82316_i0 PRJNA906294 86430 464 1.976982 9.17319648 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 121 2.68e-29   NR XP_013755586.1 461836 g82316 i0 44.8 0.9375 145 77 93.1 2 445 14 189 331 XP_013755586.1 pregnancy-associated glycoprotein 6 [Thecamonas trahens ATCC 50062] diamond 435 121 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30055805 30055805 PRJNA906294_P_NODE_228151_length_242_cov_0.899408_g224035_i0 PRJNA906294 228151 242 0.899408 2.17656736 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 50.4 7.12e-5   NR XP_013756038.1 461836 g224035 i0 31.5 0.90495867768595 73 50 90.5 0 1 219 788 860 XP_013756038.1 uncharacterized protein AMSG_12074 [Thecamonas trahens ATCC 50062] diamond 219 50.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30118992 30118992 PRJNA906294_P_NODE_140872_length_325_cov_1.583333_g136756_i0 PRJNA906294 140872 325 1.583333 5.14583225 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 61.2 3.35e-8   NR XP_013757898.1 461836 g136756 i0 40 1.15384615384615 65 38 59.1 1 94 285 3138 3202 XP_013757898.1 uncharacterized protein AMSG_05495 [Thecamonas trahens ATCC 50062] diamond 375 61.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31319822 31319822 PRJNA906294_P_NODE_214175_length_247_cov_0.873563_g210059_i0 PRJNA906294 214175 247 0.873563 2.15770061 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 73.2 8.05e-14   NR XP_013753426.1 461836 g210059 i0 43.9 0.995951417004049 82 46 99.6 0 246 1 48 129 XP_013753426.1 uncharacterized protein AMSG_10226 [Thecamonas trahens ATCC 50062] diamond 246 73.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31636103 31636103 PRJNA906294_P_NODE_133956_length_336_cov_2.794677_g129840_i0 PRJNA906294 133956 336 2.794677 9.39011472 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 100 2.47e-25   NR XP_013758440.1 461836 g129840 i0 59.3 0.767857142857143 86 31 76.8 2 39 296 1 82 XP_013758440.1 uncharacterized protein AMSG_04774 [Thecamonas trahens ATCC 50062] diamond 258 100 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32647877 32647877 PRJNA906294_P_NODE_191020_length_264_cov_1.586387_g186904_i0 PRJNA906294 191020 264 1.586387 4.18806168 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 97.1 1.03e-21   NR XP_013760841.1 461836 g186904 i0 57.1 0.954545454545455 84 36 95.5 0 262 11 34 117 XP_013760841.1 deoxyguanosine kinase [Thecamonas trahens ATCC 50062] diamond 252 97.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32774061 32774061 PRJNA906294_P_NODE_218360_length_245_cov_1.325581_g214244_i0 PRJNA906294 218360 245 1.325581 3.24767345 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 74.7 1.97e-13   NR XP_013754869.1 461836 g214244 i0 48 0.918367346938776 75 35 91.8 2 240 16 88 158 XP_013754869.1 uncharacterized protein AMSG_09154 [Thecamonas trahens ATCC 50062] diamond 225 74.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32837072 32837072 PRJNA906294_P_NODE_228560_length_242_cov_0.899408_g224444_i0 PRJNA906294 228560 242 0.899408 2.17656736 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 56.6 4.75e-7   NR XP_013754814.1 461836 g224444 i0 37.2 3.74380165289256 78 47 96.7 2 236 3 226 301 XP_013754814.1 uncharacterized protein AMSG_09085 [Thecamonas trahens ATCC 50062] diamond 906 56.6 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;