RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA904835" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA904835 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13636731 13636731 PRJNA904835_P_NODE_34271_length_331_cov_1.492248_g34015_i0 PRJNA904835 34271 331 1.492248 4.93934088 Candidatus Limnocylindrales bacterium 2952938 Bacteria Bacteria 202 1.56e-64   NR HET7180915.1 2952938 g34015 i0 86.9 0.969788519637462 107 14 97 0 10 330 1 107 HET7180915.1 hypothetical protein [Candidatus Limnocylindrales bacterium] diamond 321 202 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium
31319763 31319763 PRJNA904835_P_NODE_44755_length_277_cov_1.509804_g44499_i0 PRJNA904835 44755 277 1.509804 4.18215708 Chloroflexota bacterium 2026724 Bacteria Bacteria 43.1 0.0417   NR MCH8817525.1 2026724 g44499 i0 35.4 0.855595667870036 79 50 85.6 1 34 270 645 722 MCH8817525.1 TIGR03663 family protein [Chloroflexota bacterium] diamond 237 43.1 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
32899896 32899896 PRJNA904835_P_NODE_19540_length_458_cov_1.625974_g19285_i0 PRJNA904835 19540 458 1.625974 7.44696092 Anaerolineae bacterium 2052143 Bacteria Bacteria 60.5 1.72e-7   NR MFN2217334.1 2052143 g19285 i0 36.9 2.1353711790393 111 64 69.4 4 55 372 185 294 MFN2217334.1 META domain-containing protein [Anaerolineae bacterium] diamond 978 60.5 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;