RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA904835" and tax_kingdom = "Thermotogati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA904835 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29424061 29424061 PRJNA904835_P_NODE_30509_length_355_cov_1.113475_g30253_i0 PRJNA904835 30509 355 1.113475 3.95283625 Fervidobacterium sp. 1871331 Bacteria Bacteria 48.5 0.00106   NR MFN3692273.1 1871331 g30253 i0 28.3 0.954929577464789 113 80 95.5 1 355 17 76 187 MFN3692273.1 transposase family protein [Fervidobacterium sp.] diamond 339 48.5 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium sp.
30631999 30631999 PRJNA904835_P_NODE_44353_length_279_cov_1.121359_g44097_i0 PRJNA904835 44353 279 1.121359 3.12859161 FCB group 1783270 Bacteria Bacteria 66.6 2.27e-10   NR WP_047264762.1 1428448 g44097 i0 40.2 12.3118279569892 87 52 93.5 0 4 264 420 506 WP_047264762.1 ATP-binding protein [Marinitoga sp. 1155] diamond 3435 66.6 1 Bacteria   Thermotogati Thermotogota Thermotogae Petrotogales Petrotogaceae Marinitoga Marinitoga sp. 1155

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;